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Protein
Submitted name:

GA16661

Gene

Dpse\GA16661

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
GA16661Imported
Gene namesi
Name:Dpse\GA16661Imported
ORF Names:Dpse_GA16661Imported, GA16661Imported
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)Imported
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000001819: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0076676. Dpse\GA16661.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

InParanoidiQ2LZY7.
KOiK14209.
OMAiCAYHFGV.
OrthoDBiEOG7Q5HD5.

Family and domain databases

InterProiIPR013057. AA_transpt_TM.
[Graphical view]
PfamiPF01490. Aa_trans. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2LZY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSSQQKQQH QQQKKVRGRR HRLAIRMDPE LKRNLVPFHV RALGVAQRSM
60 70 80 90 100
GSPLVYEAQV LRPDVESTMT YFVDILMCAY HFGVDCVYIV FIAKNLKFLG
110 120 130 140 150
DLYLYPMDLR LYMALLILPL ILTFLVRNLK YLLPFTVISN ILTVASFGII
160 170 180 190 200
FWYLVQDLPS LEGRQATQHW TQFPLFFGTV LFAIESLGVI LALQRSMRHP
210 220 230 240 250
ENFLGSCGVL NRAMVLVVLF YAAFGFFGYW QYGRDTANSI LHNLPPHEIL
260 270 280 290 300
PQCVMGMFAM AMFFSYALQG YVTVDIIWRG YMRPKLVENV ASGRSVEYLV
310 320 330 340 350
RLALVIASVL VAIGYPDFGL LLSFVGSFCL AQLGLIFPGI VNMCVLYSQG
360 370 380 390
YGYGKILLWR SLFFLVLGLW GGISGTVISV KELNEAYPIV I
Length:391
Mass (Da):44,395
Last modified:October 14, 2008 - v2
Checksum:iCE9A24DE11B425F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL31150.2.
RefSeqiXP_001353636.2. XM_001353600.2.

Genome annotation databases

EnsemblMetazoaiFBtr0275945; FBpp0274383; FBgn0076676.
GeneIDi4813664.
KEGGidpo:Dpse_GA16661.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL31150.2.
RefSeqiXP_001353636.2. XM_001353600.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0275945; FBpp0274383; FBgn0076676.
GeneIDi4813664.
KEGGidpo:Dpse_GA16661.

Organism-specific databases

FlyBaseiFBgn0076676. Dpse\GA16661.

Phylogenomic databases

InParanoidiQ2LZY7.
KOiK14209.
OMAiCAYHFGV.
OrthoDBiEOG7Q5HD5.

Family and domain databases

InterProiIPR013057. AA_transpt_TM.
[Graphical view]
PfamiPF01490. Aa_trans. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution."
    Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L.
    , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A.
    Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25 / Tucson 14011-0121.94Imported.
  2. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25Imported.

Entry informationi

Entry nameiQ2LZY7_DROPS
AccessioniPrimary (citable) accession number: Q2LZY7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: October 14, 2008
Last modified: January 7, 2015
This is version 39 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.