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Protein
Submitted name:

Gad1

Gene

Gad1

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Gad1Imported (EC:4.1.1.-Imported)
Gene namesi
Name:Gad1Imported
Synonyms:Dpse\Gad1Imported
ORF Names:Dpse_GA13411Imported, GA13411Imported
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)Imported
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000001819 Componenti: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0023295. Dpse\Gad1.

Interactioni

Protein-protein interaction databases

STRINGi7237.FBpp0275205.

Structurei

3D structure databases

ProteinModelPortaliQ2LZW7.
SMRiQ2LZW7. Positions 15-509.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiQ2LZW7.
KOiK01580.
OMAiEYLYTKI.
PhylomeDBiQ2LZW7.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2LZW7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLNPNGYKL SERTGKLTAY DLMPTTVSAG PETQEFLLKV VDVLLDFVKA
60 70 80 90 100
TNDRNEKVLD FHHPEDLKRL LDLEVPDRAL PLQQLIEDCA TTLKYQVKTG
110 120 130 140 150
HPHFFNQLSN GLDLISMAGE WLTATANTNM FTYEIAPVFI LMETVVLTKM
160 170 180 190 200
REIIGWSGGD SILAPGGSIS NLYAFLAARH KMFPNYKEHG SRGLPGNLAM
210 220 230 240 250
FTSDQCHYSI KSCAAVCGLG TDHCIVVPSD EHGKMITSEL ERLILERKAK
260 270 280 290 300
GDIPFFVNAT AGTTVLGAFD DINTIADICE KYNCWMHIDA AWGGGLLMSR
310 320 330 340 350
KHRHPRFTGV ERADSVTWNP HKLMGALLQC STIHFKEDGL LISCNQMSAE
360 370 380 390 400
YLFMTDKHYD ISYDTGDKVI QCGRHNDIFK LWLQWRAKGT EGFEQQQDRL
410 420 430 440 450
MELVQYQLKR IRAQSDRFHL ILEPECVNVS FWYVPKRLRG VPHDARKETE
460 470 480 490 500
LGKICPIIKG RMMQKGSLMV GYQPDDRRPN FFRSIISSAA VNEADVDFML
510
DEIHRLGDDL
Length:510
Mass (Da):57,756
Last modified:February 21, 2006 - v1
Checksum:i112C34A9630AA775
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL31170.1.
RefSeqiXP_001353656.1. XM_001353620.2.

Genome annotation databases

EnsemblMetazoaiFBtr0276767; FBpp0275205; FBgn0023295.
GeneIDi4813307.
KEGGidpo:Dpse_GA13411.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL31170.1.
RefSeqiXP_001353656.1. XM_001353620.2.

3D structure databases

ProteinModelPortaliQ2LZW7.
SMRiQ2LZW7. Positions 15-509.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7237.FBpp0275205.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0276767; FBpp0275205; FBgn0023295.
GeneIDi4813307.
KEGGidpo:Dpse_GA13411.

Organism-specific databases

FlyBaseiFBgn0023295. Dpse\Gad1.

Phylogenomic databases

InParanoidiQ2LZW7.
KOiK01580.
OMAiEYLYTKI.
PhylomeDBiQ2LZW7.

Miscellaneous databases

ChiTaRSiGad1. fly.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution."
    Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L.
    , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A.
    Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25 / Tucson 14011-0121.94Imported.
  2. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25Imported.

Entry informationi

Entry nameiQ2LZW7_DROPS
AccessioniPrimary (citable) accession number: Q2LZW7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: January 7, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.