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Protein
Submitted name:

GA19644

Gene

Dpse\GA19644

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. chromatin binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GA19644Imported
Gene namesi
Name:Dpse\GA19644Imported
ORF Names:Dpse_GA19644Imported, GA19644Imported
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)Imported
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000001819: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0079640. Dpse\GA19644.

Interactioni

Protein-protein interaction databases

STRINGi7237.FBpp0274268.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

InParanoidiQ2LZJ3.
KOiK11430.
OMAiSKVWQAK.
OrthoDBiEOG7VB2DR.
PhylomeDBiQ2LZJ3.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2LZJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNAKVPPEW KRRVKSEYFK IRQQKRHKRA DEIKEAWIKN WDEHNHNVQD
60 70 80 90 100
LYCESKVWQA KPYEPPHVGC VKRAEITSYS GNPSGPQRVP ICVINAVTPI
110 120 130 140 150
PTMYTWAPTQ QNFMVEDETV LHNIPYMGDE VLDKDGKFIE ELIKNYDGKV
160 170 180 190 200
HGDKDPSFMD DAIFVELVHA LMRSHSKELE EPAPSTSAKA ETAVKPKEAK
210 220 230 240 250
EGDDEEIKVD VKVDEKKEAS TDEKKEEPSG AEAAVDVKPA VEEVKEKLPF
260 270 280 290 300
PAPIIFQAIS ANFPDKGTAQ ELKEKYIELT EHQDPERPQE CTPNIDGMKA
310 320 330 340 350
ESVSRERTMH SFHTLFCRRC FKYDCFLHRL QNHAGPNLQK RVFEEMKTFA
360 370 380 390 400
DPCSNSCYML IDGMKEKLAA DSKTPPIDSC NEASSEDSND SNSQFSSKDF
410 420 430 440 450
SNENTKDNGP TVNCVAEEEV NSIMAGMMNI DSTQCVWTGA DQALFRVLHK
460 470 480 490 500
VYLRNYCAIA HNMLTKTCRQ VYEFAQKDDA EFSIDDLLLD YTPPRKKKKK
510 520 530 540 550
QRLWSLHCRK IQLKKDSSSN HVYNYTPCDH AGPCDVNCSC IQTQNFCEKF
560 570 580 590 600
CNCTTECQNR FPGCRCKAQC NTKQCPCYLA VRECDPDLCN ACGANEFKLQ
610 620 630 640 650
KITCKNVCVQ RGLHKHLLMA PSDIAGWGIF LKEGAQKNEF ISEYCGEIIS
660 670 680 690 700
QDEADRRGKV YDKYMCSFLF NLNNDFVVDA TRKGNKIRFA NHSINPNCYA
710 720 730 740
KVMMVTGDHR IGIFAKRAIQ PGEELFFDYR YGPTEQLKFV GIEREMEIV
Length:749
Mass (Da):85,612
Last modified:February 21, 2006 - v1
Checksum:i241AEBDCA4B66D34
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL29514.1.
RefSeqiXP_001353780.1. XM_001353744.2.

Genome annotation databases

EnsemblMetazoaiFBtr0275830; FBpp0274268; FBgn0079640.
GeneIDi4813247.
KEGGidpo:Dpse_GA19644.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379069 Genomic DNA. Translation: EAL29514.1.
RefSeqiXP_001353780.1. XM_001353744.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7237.FBpp0274268.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0275830; FBpp0274268; FBgn0079640.
GeneIDi4813247.
KEGGidpo:Dpse_GA19644.

Organism-specific databases

FlyBaseiFBgn0079640. Dpse\GA19644.

Phylogenomic databases

InParanoidiQ2LZJ3.
KOiK11430.
OMAiSKVWQAK.
OrthoDBiEOG7VB2DR.
PhylomeDBiQ2LZJ3.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution."
    Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L.
    , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A.
    Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25 / Tucson 14011-0121.94Imported.
  2. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25Imported.

Entry informationi

Entry nameiQ2LZJ3_DROPS
AccessioniPrimary (citable) accession number: Q2LZJ3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: March 4, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.