Q2LWJ0 (Q2LWJ0_SYNAS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA 3'-terminal phosphate cyclase EMBL ABC78452.1
EC=6.5.1.4 EMBL ABC78452.1

Gene names

Ordered Locus Names:	SYNAS_25730
ORF Names:	SYN_00093 EMBL ABC78452.1

Organism

Syntrophus aciditrophicus (strain SB) [Complete proteome] [HAMAP]

Taxonomic identifier

56780 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Syntrophobacterales › Syntrophaceae › Syntrophus

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABC78452.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular function	RNA-3'-phosphate cyclase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2LWJ0 [UniParc]. Last modified February 21, 2006. Version 1. Checksum: 18226A2D9741E16D	FASTA	355	38,765
	10 20 30 40 50 60 MIEIDGSQKS GSGTIVRDAV SLSALAGRDL HLTNIRAKRR PKPGLRAQHL RGIEAIAELC 70 80 90 100 110 120 RGRLEGAAIS SGEIRFFPGQ TIRGGRYDWD IGTAGSTTML VLCVLPLALF ADGPSLFRIT 130 140 150 160 170 180 GGLFQDFAPS VYSLQTVLLP LLRRMGAQID LRIMRPGYVP QGQGQITVDV TPLKRPLKPL 190 200 210 220 230 240 ILTAQGNLLE IRGIALSSLL KERQVSERMA EECRKTLQAE GHDARIDLLY DTAGNPVYEK 250 260 270 280 290 300 SAVQAGAALA LWAKTDTECL LGADRAGAPR RSSETIGRQV ARMMTETLQT GATLDVHAAD 310 320 330 340 350 QIIPFAALAE GESSFVIPRM TDHIDSRLWL VETFLGAETE LRDRTLRIRG IGYRR

References

[1]

"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential." Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., Mclerney M., Moutakki H., Rio-Hernandez L. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000252 Genomic DNA. Translation: ABC78452.1.
RefSeq	YP_462620.1. NC_007759.1.
3D structure databases
ProteinModelPortal	Q2LWJ0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2LWJ0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3883583.
GenomeReviews	Gene locus SYNAS_25730 in contig CP000252_GR.
KEGG	sat:SYN_00093.
NMPDR	fig|56780.10.peg.2565.
PATRIC	23866008. VBISynAci70500_2785.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0430.
HOGENOM	HBG683539.
OMA	HYLALVW.
PhylomeDB	Q2LWJ0.
ProtClustDB	CLSK2311662.
Enzyme and pathway databases
BioCyc	SACI56780:SYN_00093-MONOMER.
Family and domain databases
InterPro	IPR013791. RNA3'-term_phos_cycl_insert. IPR023797. RNA3'_phos_cyclase_dom. IPR000228. RNA3'_term_phos_cyc. IPR017770. RNA3'_term_phos_cyc_type_1. IPR013796. RNA3'_term_phos_cycl_insert. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view]
Gene3D	G3DSA:3.30.360.20. G3DSA:3.30.360.20. 1 hit. G3DSA:3.65.10.20. RNA3'_term_phos_cycl. 2 hits.
KO	K01974.
PANTHER	PTHR11096. RNA3'_term_phos_cycl. 1 hit.
Pfam	PF01137. RTC. 1 hit. PF05189. RTC_insert. 1 hit. [Graphical view]
SUPFAM	SSF52913. RNA3'-term_phos_cycl_insert. 1 hit. SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMs	TIGR03399. RNA_3prim_cycl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2LWJ0_SYNAS

Accession

Primary (citable) accession number: Q2LWJ0

Entry history

Integrated into UniProtKB/TrEMBL:	February 21, 2006
Last sequence update:	February 21, 2006
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)