Q2LW88 (Q2LW88_SYNAS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Ordered Locus Names:	SYNAS_24730
ORF Names:	SYN_01242 EMBL ABC78352.1

Organism

Syntrophus aciditrophicus (strain SB) [Complete proteome] [HAMAP]

Taxonomic identifier

56780 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Syntrophobacterales › Syntrophaceae › Syntrophus

Protein attributes

Sequence length	428 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185 EMBL ABC78352.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	107	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	Q2LW88 [UniParc]. Last modified February 21, 2006. Version 1. Checksum: E893953DE7BCF77B	FASTA	428	47,265
	10 20 30 40 50 60 MEDKSYNPFV HAQAQFDKVA AIIGLDEATR DLLRQPMREH HVLIPVRMDD GTTKIFKGFR 70 80 90 100 110 120 VMHNDARGPA KGGIRFHPQE TADTVRALAM WMTWKCAVVN IPLGGGKGGV ICDPHNLTET 130 140 150 160 170 180 EQERLCRGWI RNLAKEMGPC IDVPAPDVMT NAKHMLWMLD EFEAIHGGKY PGFITGKPIE 190 200 210 220 230 240 MGGSLGRTEA TGFGTIYVLR EALKDLGIKP ENTSISIQGF GNVSQFAARK FSELGGKIAA 250 260 270 280 290 300 VSCWDNADKT SHTYFKKDGL DVDMLASITN TFGCINKEKA VAAGYEILPG DAWVEQDVDI 310 320 330 340 350 360 LMPAALENQI TSANVNRISE KVKVLLEGAN GPTAPEADEV IRARGIFLLP DFLANAGGVT 370 380 390 400 410 420 CSYFEQVQSN MNYYWEKDEV LERLDAKMTS AYRAVQDLAR SKGLYMRDAA YVIAINRVAQ AVKMRGWV

References

[1]

"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential." Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., Mclerney M., Moutakki H., Rio-Hernandez L. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000252 Genomic DNA. Translation: ABC78352.1.
RefSeq	YP_462520.1. NC_007759.1.
3D structure databases
ProteinModelPortal	Q2LW88.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2LW88.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3882917.
GenomeReviews	Gene locus SYNAS_24730 in contig CP000252_GR.
KEGG	sat:SYN_01242.
NMPDR	fig|56780.10.peg.2466.
PATRIC	23865786. VBISynAci70500_2674.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
HOGENOM	HBG590661.
OMA	RLDAKMT.
PhylomeDB	Q2LW88.
ProtClustDB	CLSK771826.
Enzyme and pathway databases
BioCyc	SACI56780:SYN_01242-MONOMER.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00261.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
PROSITE	PS00074. GLFV_DEHYDROGENASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2LW88_SYNAS

Accession

Primary (citable) accession number: Q2LW88

Entry history

Integrated into UniProtKB/TrEMBL:	February 21, 2006
Last sequence update:	February 21, 2006
Last modified:	January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)