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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

SYN_01236

Organism
Syntrophus aciditrophicus (strain SB)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSACI56780:GHXT-2517-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
ORF Names:SYN_01236Imported
OrganismiSyntrophus aciditrophicus (strain SB)Imported
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
ProteomesiUP000001933 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_01236.

Structurei

3D structure databases

ProteinModelPortaliQ2LW85.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000086482.
OMAiRIEDIQH.
OrthoDBiEOG6MH582.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2LW85-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMKLGTKLL TGGLLVVAIP LIVIGIASIY IAKDSISTIA HDEMANVSNA
60 70 80 90 100
LASNIDLGLT EEMRRSQDIS FSNSAVAAAE KVAKAGKEDS QSEIALVQRE
110 120 130 140 150
LTRIREAAGD RYETIVLFGT DGIVFADAVQ GRDHGIDASD RDYFKKAMQG
160 170 180 190 200
KCNLSDVVRS KATGNLICMA ACPIFSEKSR KIVGVAGCAI NVSFLTELVD
210 220 230 240 250
KVKIGQTGYS VLLNREGVVL AHPNKENILT LNYKSLKGKG IDLLGKKIAS
260 270 280 290 300
QESGMVEYEF QGVDKVGAFT NIKTTGWTAF TSIPRDELFK PAVFTGNLIA
310 320 330 340 350
VVGFISLLLA AAFFYFFSRS LTRPLEKVVS AAEQIAEGDL SVQISDENRQ
360 370 380 390 400
DEIGMLARAF MKMTQSLQEK AGVLQQIAAG NLTVEMKTPS DRDVMGKAFA
410 420 430 440 450
AMISALRAEM QSIREAVNVI ASSATQISAS TTELASAASQ TASAVSETTS
460 470 480 490 500
TVEEVKQTAH LSTQKATHVF DSAQKATEVS QQGRKAIDLA VEGMNFIRTQ
510 520 530 540 550
TDSISESIVK LSERSQAIGE IIATVNDIAD QSNLLAVNAA IEAAKAGDQG
560 570 580 590 600
KGFAVVAQEV RNLAEQSKQA TSQVRTILNE IQKAVGEAVM STEQEIKAVE
610 620 630 640 650
AGMRQTSEAG NSFRRLSDTI EESAQAATQI TASSQQQLVG MDQVVLAITN
660 670 680
INQASSQNVA GAKQVETAAQ NLHDLGQQLK QLIDRYRL
Length:688
Mass (Da):73,665
Last modified:February 21, 2006 - v1
Checksum:iAA987529C3411AF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC78346.1.
RefSeqiYP_462514.1. NC_007759.1.

Genome annotation databases

EnsemblBacteriaiABC78346; ABC78346; SYN_01236.
KEGGisat:SYN_01236.
PATRICi23865774. VBISynAci70500_2668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC78346.1.
RefSeqiYP_462514.1. NC_007759.1.

3D structure databases

ProteinModelPortaliQ2LW85.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi56780.SYN_01236.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC78346; ABC78346; SYN_01236.
KEGGisat:SYN_01236.
PATRICi23865774. VBISynAci70500_2668.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000086482.
OMAiRIEDIQH.
OrthoDBiEOG6MH582.

Enzyme and pathway databases

BioCyciSACI56780:GHXT-2517-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
    Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., Mclerney M., Moutakki H., Rio-Hernandez L.
    Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBImported.

Entry informationi

Entry nameiQ2LW85_SYNAS
AccessioniPrimary (citable) accession number: Q2LW85
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: April 1, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.