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Q2LW85 (Q2LW85_SYNAS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SYN_01236 EMBL ABC78346.1
OrganismSyntrophus aciditrophicus (strain SB) [Complete proteome] [HAMAP] EMBL ABC78346.1
Taxonomic identifier56780 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus

Protein attributes

Sequence length688 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2LW85 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: AA987529C3411AF6

FASTA68873,665
        10         20         30         40         50         60 
MKMKLGTKLL TGGLLVVAIP LIVIGIASIY IAKDSISTIA HDEMANVSNA LASNIDLGLT 

        70         80         90        100        110        120 
EEMRRSQDIS FSNSAVAAAE KVAKAGKEDS QSEIALVQRE LTRIREAAGD RYETIVLFGT 

       130        140        150        160        170        180 
DGIVFADAVQ GRDHGIDASD RDYFKKAMQG KCNLSDVVRS KATGNLICMA ACPIFSEKSR 

       190        200        210        220        230        240 
KIVGVAGCAI NVSFLTELVD KVKIGQTGYS VLLNREGVVL AHPNKENILT LNYKSLKGKG 

       250        260        270        280        290        300 
IDLLGKKIAS QESGMVEYEF QGVDKVGAFT NIKTTGWTAF TSIPRDELFK PAVFTGNLIA 

       310        320        330        340        350        360 
VVGFISLLLA AAFFYFFSRS LTRPLEKVVS AAEQIAEGDL SVQISDENRQ DEIGMLARAF 

       370        380        390        400        410        420 
MKMTQSLQEK AGVLQQIAAG NLTVEMKTPS DRDVMGKAFA AMISALRAEM QSIREAVNVI 

       430        440        450        460        470        480 
ASSATQISAS TTELASAASQ TASAVSETTS TVEEVKQTAH LSTQKATHVF DSAQKATEVS 

       490        500        510        520        530        540 
QQGRKAIDLA VEGMNFIRTQ TDSISESIVK LSERSQAIGE IIATVNDIAD QSNLLAVNAA 

       550        560        570        580        590        600 
IEAAKAGDQG KGFAVVAQEV RNLAEQSKQA TSQVRTILNE IQKAVGEAVM STEQEIKAVE 

       610        620        630        640        650        660 
AGMRQTSEAG NSFRRLSDTI EESAQAATQI TASSQQQLVG MDQVVLAITN INQASSQNVA 

       670        680 
GAKQVETAAQ NLHDLGQQLK QLIDRYRL 

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References

[1]"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SB EMBL ABC78346.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000252 Genomic DNA. Translation: ABC78346.1.
RefSeqYP_462514.1. NC_007759.1.

3D structure databases

ProteinModelPortalQ2LW85.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING56780.SYN_01236.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC78346; ABC78346; SYN_01236.
GeneID3882911.
KEGGsat:SYN_01236.
PATRIC23865774. VBISynAci70500_2668.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000086482.
OMARIEDIQH.
OrthoDBEOG6MH582.

Enzyme and pathway databases

BioCycSACI56780:GHXT-2517-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2LW85_SYNAS
AccessionPrimary (citable) accession number: Q2LW85
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)