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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

SYN_01236

Organism
Syntrophus aciditrophicus (strain SB)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciSACI56780:G1G5X-2351-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
ORF Names:SYN_01236Imported
OrganismiSyntrophus aciditrophicus (strain SB)Imported
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
Proteomesi
  • UP000001933 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Transmembranei298 – 317HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_01236

Structurei

3D structure databases

ProteinModelPortaliQ2LW85
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini319 – 372HAMPInterPro annotationAdd BLAST54
Domaini416 – 652Methyl-accepting transducerInterPro annotationAdd BLAST237

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili87 – 107Sequence analysisAdd BLAST21
Coiled coili560 – 580Sequence analysisAdd BLAST21
Coiled coili665 – 685Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000086482
OMAiQNHKSIL
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR033479 dCache_1
IPR003660 HAMP_dom
IPR004089 MCPsignal_dom
IPR029151 Sensor-like_sf
PfamiView protein in Pfam
PF02743 dCache_1, 1 hit
PF00672 HAMP, 1 hit
PF00015 MCPsignal, 1 hit
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
SUPFAMiSSF103190 SSF103190, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

Q2LW85-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMKLGTKLL TGGLLVVAIP LIVIGIASIY IAKDSISTIA HDEMANVSNA
60 70 80 90 100
LASNIDLGLT EEMRRSQDIS FSNSAVAAAE KVAKAGKEDS QSEIALVQRE
110 120 130 140 150
LTRIREAAGD RYETIVLFGT DGIVFADAVQ GRDHGIDASD RDYFKKAMQG
160 170 180 190 200
KCNLSDVVRS KATGNLICMA ACPIFSEKSR KIVGVAGCAI NVSFLTELVD
210 220 230 240 250
KVKIGQTGYS VLLNREGVVL AHPNKENILT LNYKSLKGKG IDLLGKKIAS
260 270 280 290 300
QESGMVEYEF QGVDKVGAFT NIKTTGWTAF TSIPRDELFK PAVFTGNLIA
310 320 330 340 350
VVGFISLLLA AAFFYFFSRS LTRPLEKVVS AAEQIAEGDL SVQISDENRQ
360 370 380 390 400
DEIGMLARAF MKMTQSLQEK AGVLQQIAAG NLTVEMKTPS DRDVMGKAFA
410 420 430 440 450
AMISALRAEM QSIREAVNVI ASSATQISAS TTELASAASQ TASAVSETTS
460 470 480 490 500
TVEEVKQTAH LSTQKATHVF DSAQKATEVS QQGRKAIDLA VEGMNFIRTQ
510 520 530 540 550
TDSISESIVK LSERSQAIGE IIATVNDIAD QSNLLAVNAA IEAAKAGDQG
560 570 580 590 600
KGFAVVAQEV RNLAEQSKQA TSQVRTILNE IQKAVGEAVM STEQEIKAVE
610 620 630 640 650
AGMRQTSEAG NSFRRLSDTI EESAQAATQI TASSQQQLVG MDQVVLAITN
660 670 680
INQASSQNVA GAKQVETAAQ NLHDLGQQLK QLIDRYRL
Length:688
Mass (Da):73,665
Last modified:February 21, 2006 - v1
Checksum:iAA987529C3411AF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA Translation: ABC78346.1
RefSeqiWP_011418365.1, NC_007759.1

Genome annotation databases

EnsemblBacteriaiABC78346; ABC78346; SYN_01236
KEGGisat:SYN_01236

Similar proteinsi

Entry informationi

Entry nameiQ2LW85_SYNAS
AccessioniPrimary (citable) accession number: Q2LW85
Entry historyiIntegrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: February 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported