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Q2LV73

- Q2LV73_SYNAS

UniProt

Q2LV73 - Q2LV73_SYNAS

Protein

Alpha-amylase

Gene

SYN_00687

Organism
Syntrophus aciditrophicus (strain SB)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (21 Feb 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSACI56780:GHXT-2150-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:SYN_00687Imported
    OrganismiSyntrophus aciditrophicus (strain SB)Imported
    Taxonomic identifieri56780 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
    ProteomesiUP000001933: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi56780.SYN_00687.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2LV73.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    KOiK01176.
    OMAiTHPYADY.
    OrthoDBiEOG6CZQGF.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2LV73-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIPASAMPLT QNIYKNLKPR INQPEEIMAI TRKDIIYFII TDRFYGIENQ    50
    KPEVKQKINK DNPFFYHGGN FDGIIEKIPY LKNLGITALW ITPVYRQIDL 100
    ETAHGYHGYW ALDFNAVNPV LYIDNGHYLP GSKYYLRDLV DRLHMNGIKL 150
    ILDVVVNHTG YRHPGIFDSL DNPTPICSSW FNRMNISLET SETEGQLSGL 200
    PDMDLDLPDV CDYHTETILS WLRETGVDGI RMDTVKHVER NFWTYFKTQV 250
    KGQFPGVTLL GEVLVFDIDN LSQYQKYDAI DQLFDFPMQN AIKNVFVYDH 300
    GMTDFISPYN IGTGILERDR SYSNHNQLVT LLDNHDLSAR FMTWILDRQA 350
    GDYRKATDVM KLTLTFLFTI RGIPQIYYGT ELGLEGHSDP DNRRDFPWEK 400
    LNADYEVKTE YSHEKEIYDH TRKMISIRRS NDALSSGYFV CLYVDYFLMI 450
    FLRYVEDNIV IAGFHNGWLD MPSEVIIDIG HNPDLPRRIR EKLSDATLVS 500
    LLDNQLHPIR EGKLKIRLGK KSAIILTIKN Q 531
    Length:531
    Mass (Da):61,722
    Last modified:February 21, 2006 - v1
    Checksum:i5B25DD57EC1752C8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000252 Genomic DNA. Translation: ABC77981.1.
    RefSeqiYP_462149.1. NC_007759.1.

    Genome annotation databases

    EnsemblBacteriaiABC77981; ABC77981; SYN_00687.
    GeneIDi3884191.
    KEGGisat:SYN_00687.
    PATRICi23864968. VBISynAci70500_2267.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000252 Genomic DNA. Translation: ABC77981.1 .
    RefSeqi YP_462149.1. NC_007759.1.

    3D structure databases

    ProteinModelPortali Q2LV73.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 56780.SYN_00687.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC77981 ; ABC77981 ; SYN_00687 .
    GeneIDi 3884191.
    KEGGi sat:SYN_00687.
    PATRICi 23864968. VBISynAci70500_2267.

    Phylogenomic databases

    eggNOGi COG0366.
    KOi K01176.
    OMAi THPYADY.
    OrthoDBi EOG6CZQGF.

    Enzyme and pathway databases

    BioCyci SACI56780:GHXT-2150-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
      Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., Mclerney M., Moutakki H., Rio-Hernandez L.
      Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SBImported.

    Entry informationi

    Entry nameiQ2LV73_SYNAS
    AccessioniPrimary (citable) accession number: Q2LV73
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 21, 2006
    Last sequence update: February 21, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3