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Q2LV73 (Q2LV73_SYNAS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length531 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2LV73 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: 5B25DD57EC1752C8

FASTA53161,722
        10         20         30         40         50         60 
MIPASAMPLT QNIYKNLKPR INQPEEIMAI TRKDIIYFII TDRFYGIENQ KPEVKQKINK 

        70         80         90        100        110        120 
DNPFFYHGGN FDGIIEKIPY LKNLGITALW ITPVYRQIDL ETAHGYHGYW ALDFNAVNPV 

       130        140        150        160        170        180 
LYIDNGHYLP GSKYYLRDLV DRLHMNGIKL ILDVVVNHTG YRHPGIFDSL DNPTPICSSW 

       190        200        210        220        230        240 
FNRMNISLET SETEGQLSGL PDMDLDLPDV CDYHTETILS WLRETGVDGI RMDTVKHVER 

       250        260        270        280        290        300 
NFWTYFKTQV KGQFPGVTLL GEVLVFDIDN LSQYQKYDAI DQLFDFPMQN AIKNVFVYDH 

       310        320        330        340        350        360 
GMTDFISPYN IGTGILERDR SYSNHNQLVT LLDNHDLSAR FMTWILDRQA GDYRKATDVM 

       370        380        390        400        410        420 
KLTLTFLFTI RGIPQIYYGT ELGLEGHSDP DNRRDFPWEK LNADYEVKTE YSHEKEIYDH 

       430        440        450        460        470        480 
TRKMISIRRS NDALSSGYFV CLYVDYFLMI FLRYVEDNIV IAGFHNGWLD MPSEVIIDIG 

       490        500        510        520        530 
HNPDLPRRIR EKLSDATLVS LLDNQLHPIR EGKLKIRLGK KSAIILTIKN Q 

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References

[1]"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SB EMBL ABC77981.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000252 Genomic DNA. Translation: ABC77981.1.
RefSeqYP_462149.1. NC_007759.1.

3D structure databases

ProteinModelPortalQ2LV73.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING56780.SYN_00687.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC77981; ABC77981; SYN_00687.
GeneID3884191.
KEGGsat:SYN_00687.
PATRIC23864968. VBISynAci70500_2267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
KOK01176.
OMATHPYADY.
OrthoDBEOG6CZQGF.

Enzyme and pathway databases

BioCycSACI56780:GHXT-2150-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2LV73_SYNAS
AccessionPrimary (citable) accession number: Q2LV73
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: July 9, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)