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Q2LV73

- Q2LV73_SYNAS

UniProt

Q2LV73 - Q2LV73_SYNAS

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Protein

Alpha-amylase

Gene
SYN_00687
Organism
Syntrophus aciditrophicus (strain SB)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSACI56780:GHXT-2150-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:SYN_00687Imported
OrganismiSyntrophus aciditrophicus (strain SB)Imported
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
ProteomesiUP000001933: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_00687.

Structurei

3D structure databases

ProteinModelPortaliQ2LV73.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
KOiK01176.
OMAiTHPYADY.
OrthoDBiEOG6CZQGF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2LV73-1 [UniParc]FASTAAdd to Basket

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MIPASAMPLT QNIYKNLKPR INQPEEIMAI TRKDIIYFII TDRFYGIENQ    50
KPEVKQKINK DNPFFYHGGN FDGIIEKIPY LKNLGITALW ITPVYRQIDL 100
ETAHGYHGYW ALDFNAVNPV LYIDNGHYLP GSKYYLRDLV DRLHMNGIKL 150
ILDVVVNHTG YRHPGIFDSL DNPTPICSSW FNRMNISLET SETEGQLSGL 200
PDMDLDLPDV CDYHTETILS WLRETGVDGI RMDTVKHVER NFWTYFKTQV 250
KGQFPGVTLL GEVLVFDIDN LSQYQKYDAI DQLFDFPMQN AIKNVFVYDH 300
GMTDFISPYN IGTGILERDR SYSNHNQLVT LLDNHDLSAR FMTWILDRQA 350
GDYRKATDVM KLTLTFLFTI RGIPQIYYGT ELGLEGHSDP DNRRDFPWEK 400
LNADYEVKTE YSHEKEIYDH TRKMISIRRS NDALSSGYFV CLYVDYFLMI 450
FLRYVEDNIV IAGFHNGWLD MPSEVIIDIG HNPDLPRRIR EKLSDATLVS 500
LLDNQLHPIR EGKLKIRLGK KSAIILTIKN Q 531
Length:531
Mass (Da):61,722
Last modified:February 21, 2006 - v1
Checksum:i5B25DD57EC1752C8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000252 Genomic DNA. Translation: ABC77981.1.
RefSeqiYP_462149.1. NC_007759.1.

Genome annotation databases

EnsemblBacteriaiABC77981; ABC77981; SYN_00687.
GeneIDi3884191.
KEGGisat:SYN_00687.
PATRICi23864968. VBISynAci70500_2267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000252 Genomic DNA. Translation: ABC77981.1 .
RefSeqi YP_462149.1. NC_007759.1.

3D structure databases

ProteinModelPortali Q2LV73.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 56780.SYN_00687.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC77981 ; ABC77981 ; SYN_00687 .
GeneIDi 3884191.
KEGGi sat:SYN_00687.
PATRICi 23864968. VBISynAci70500_2267.

Phylogenomic databases

eggNOGi COG0366.
KOi K01176.
OMAi THPYADY.
OrthoDBi EOG6CZQGF.

Enzyme and pathway databases

BioCyci SACI56780:GHXT-2150-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
    Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
    Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBImported.

Entry informationi

Entry nameiQ2LV73_SYNAS
AccessioniPrimary (citable) accession number: Q2LV73
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: July 9, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3