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Q2LSY2 (Q2LSY2_SYNAS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length901 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABC77194.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2LSY2 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: 720CF39EE76E553B

FASTA901102,042
        10         20         30         40         50         60 
MSSVIFYFQL HQPLRLHPDR DKFLWDEENR EIFLKASERS YIPAIGMFTD LIRNHPGFRI 

        70         80         90        100        110        120 
TLSMSGTFLE QAQTYHPSLI QALRSLLDAG KESQQVEFLC ETYYHSLASL FNDPHKQEFR 

       130        140        150        160        170        180 
DQVSLHREAI RKLFGIFPLS FRNTELIYNN SIADIVADMG YVSILCEPRE NSHMGAGTGS 

       190        200        210        220        230        240 
ISPNSVFRAR GTHLVVIPRN IALSNDVAFR FSSHPLTPEE YAASIARGDG EVILLGYDLE 

       250        260        270        280        290        300 
HIGGHIREEK GIFDFWRGLP AALEQYPDLL VETPTSVATR FKDAPLPSLD ISGLSTSSWL 

       310        320        330        340        350        360 
DVIRNTFGWL ESAAQFELFK DMEGMEGVAR RAGGELLTRW RNLTASDHIY YLKDRSMDEH 

       370        380        390        400        410        420 
VLCRYENPYE RSTIRATQIL TRKIDYLEMF IKRFEILKRT EKTPILLITP ETGRLPFDMG 

       430        440        450        460        470        480 
MLAKYISGKS GGQGEVVSAL CEGLLERGID VHLATLNLKK RFQMESQMTE SQWREIRYKI 

       490        500        510        520        530        540 
DPENIHLVSS AIFADNLSAY SGDPLRTAAE FQREIVNNIL KIVRSKHEGR LIIHSHDWMA 

       550        560        570        580        590        600 
GGAITAYAKL TDVPVLHTVH NVFTENLPLD LLSGINLSGI SDYLYYSEAY GQPCIDCQAT 

       610        620        630        640        650        660 
AIKNATIINF VGKQFLREVV EDYFLDRPLV PLSVRNEVKA KYFNDAARAI INAPASSMYP 

       670        680        690        700        710        720 
ENCPFLIRKY GLDDPILQAK RENLVAFQQR TGLNVNPDAI LFYWPSRLDP VQKGIELLEA 

       730        740        750        760        770        780 
IAQKFVTAYP DAQIAIVGDG IGSDRTHVEI FGRIAYGSEG KIAYHRFDEA LSMLGFAAAN 

       790        800        810        820        830        840 
DVFGASLYEP CGQIDQVGNL FGATATNRDT GGYHDKITEL RLKMDGAPQD VGNGFLFRDY 

       850        860        870        880        890        900 
DPGGLWYGLE KSIKFHRKPP AVREAQIRRI MRQCREKYDL QTMIAQYIRI YEKLNGGKPL 


G 

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References

[1]"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SB EMBL ABC77194.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000252 Genomic DNA. Translation: ABC77194.1.
RefSeqYP_461362.1. NC_007759.1.

3D structure databases

ProteinModelPortalQ2LSY2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING56780.SYN_02854.

Protein family/group databases

CAZyGH57. Glycoside Hydrolase Family 57.
GT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC77194; ABC77194; SYN_02854.
GeneID3883024.
KEGGsat:SYN_02854.
PATRIC23863239. VBISynAci70500_1421.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1449.
KOK01176.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycSACI56780:GHXT-1345-MONOMER.

Family and domain databases

Gene3D3.20.110.10. 2 hits.
InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF03065. Glyco_hydro_57. 1 hit.
PF08323. Glyco_transf_5. 1 hit.
[Graphical view]
SUPFAMSSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2LSY2_SYNAS
AccessionPrimary (citable) accession number: Q2LSY2
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)