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Q2LSY2

- Q2LSY2_SYNAS

UniProt

Q2LSY2 - Q2LSY2_SYNAS

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Protein
Submitted name: Alpha-amylase
Gene
SYN_02854
Organism
Syntrophus aciditrophicus (strain SB)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSACI56780:GHXT-1345-MONOMER.

Protein family/group databases

CAZyiGH57. Glycoside Hydrolase Family 57.
GT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
ORF Names:SYN_02854Imported
OrganismiSyntrophus aciditrophicus (strain SB)Imported
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
ProteomesiUP000001933: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_02854.

Structurei

3D structure databases

ProteinModelPortaliQ2LSY2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1449.
KOiK01176.
OrthoDBiEOG6JTC6Z.

Family and domain databases

Gene3Di3.20.110.10. 2 hits.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
PF08323. Glyco_transf_5. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2LSY2-1 [UniParc]FASTAAdd to Basket

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MSSVIFYFQL HQPLRLHPDR DKFLWDEENR EIFLKASERS YIPAIGMFTD    50
LIRNHPGFRI TLSMSGTFLE QAQTYHPSLI QALRSLLDAG KESQQVEFLC 100
ETYYHSLASL FNDPHKQEFR DQVSLHREAI RKLFGIFPLS FRNTELIYNN 150
SIADIVADMG YVSILCEPRE NSHMGAGTGS ISPNSVFRAR GTHLVVIPRN 200
IALSNDVAFR FSSHPLTPEE YAASIARGDG EVILLGYDLE HIGGHIREEK 250
GIFDFWRGLP AALEQYPDLL VETPTSVATR FKDAPLPSLD ISGLSTSSWL 300
DVIRNTFGWL ESAAQFELFK DMEGMEGVAR RAGGELLTRW RNLTASDHIY 350
YLKDRSMDEH VLCRYENPYE RSTIRATQIL TRKIDYLEMF IKRFEILKRT 400
EKTPILLITP ETGRLPFDMG MLAKYISGKS GGQGEVVSAL CEGLLERGID 450
VHLATLNLKK RFQMESQMTE SQWREIRYKI DPENIHLVSS AIFADNLSAY 500
SGDPLRTAAE FQREIVNNIL KIVRSKHEGR LIIHSHDWMA GGAITAYAKL 550
TDVPVLHTVH NVFTENLPLD LLSGINLSGI SDYLYYSEAY GQPCIDCQAT 600
AIKNATIINF VGKQFLREVV EDYFLDRPLV PLSVRNEVKA KYFNDAARAI 650
INAPASSMYP ENCPFLIRKY GLDDPILQAK RENLVAFQQR TGLNVNPDAI 700
LFYWPSRLDP VQKGIELLEA IAQKFVTAYP DAQIAIVGDG IGSDRTHVEI 750
FGRIAYGSEG KIAYHRFDEA LSMLGFAAAN DVFGASLYEP CGQIDQVGNL 800
FGATATNRDT GGYHDKITEL RLKMDGAPQD VGNGFLFRDY DPGGLWYGLE 850
KSIKFHRKPP AVREAQIRRI MRQCREKYDL QTMIAQYIRI YEKLNGGKPL 900
G 901
Length:901
Mass (Da):102,042
Last modified:February 21, 2006 - v1
Checksum:i720CF39EE76E553B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000252 Genomic DNA. Translation: ABC77194.1.
RefSeqiYP_461362.1. NC_007759.1.

Genome annotation databases

EnsemblBacteriaiABC77194; ABC77194; SYN_02854.
GeneIDi3883024.
KEGGisat:SYN_02854.
PATRICi23863239. VBISynAci70500_1421.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000252 Genomic DNA. Translation: ABC77194.1 .
RefSeqi YP_461362.1. NC_007759.1.

3D structure databases

ProteinModelPortali Q2LSY2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 56780.SYN_02854.

Protein family/group databases

CAZyi GH57. Glycoside Hydrolase Family 57.
GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC77194 ; ABC77194 ; SYN_02854 .
GeneIDi 3883024.
KEGGi sat:SYN_02854.
PATRICi 23863239. VBISynAci70500_1421.

Phylogenomic databases

eggNOGi COG1449.
KOi K01176.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

BioCyci SACI56780:GHXT-1345-MONOMER.

Family and domain databases

Gene3Di 3.20.110.10. 2 hits.
InterProi IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF03065. Glyco_hydro_57. 1 hit.
PF08323. Glyco_transf_5. 1 hit.
[Graphical view ]
SUPFAMi SSF88713. SSF88713. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
    Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
    Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBImported.

Entry informationi

Entry nameiQ2LSY2_SYNAS
AccessioniPrimary (citable) accession number: Q2LSY2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3