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Protein

Probable chemoreceptor glutamine deamidase CheD 2

Gene

cheD2

Organism
Syntrophus aciditrophicus (strain SB)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciSACI56780:GHXT-1222-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheD 2UniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheD2UniRule annotation
Ordered Locus Names:SYNAS_11930
ORF Names:SYN_00965
OrganismiSyntrophus aciditrophicus (strain SB)
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
Proteomesi
  • UP000001933 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 172172Probable chemoreceptor glutamine deamidase CheD 2PRO_0000251070Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_00965.

Structurei

3D structure databases

ProteinModelPortaliQ2LSL4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiMNHFLFP.
OrthoDBiPOG091H0ML3.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2LSL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSKAIKPSC EYFLLPGYIF MSPEPYLIST VVGSSVAVAL WDADSKLGGM
60 70 80 90 100
LSFLYPFRES SAESTAIYGN VAITYMVRMF REEGAKKKNL RSQIFGGAES
110 120 130 140 150
DCCEADQIAH ENVKTARSVL KKHGIKVISE DVGGRLGRKI VYNTFQNEAL
160 170
IYKVNTLRNS DWYPYDGQGR QA
Length:172
Mass (Da):19,184
Last modified:February 21, 2006 - v1
Checksum:iF9326DE0E8522A7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC77072.1.
RefSeqiWP_011417101.1. NC_007759.1.

Genome annotation databases

EnsemblBacteriaiABC77072; ABC77072; SYN_00965.
KEGGisat:SYN_00965.
PATRICi23862983. VBISynAci70500_1294.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC77072.1.
RefSeqiWP_011417101.1. NC_007759.1.

3D structure databases

ProteinModelPortaliQ2LSL4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi56780.SYN_00965.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC77072; ABC77072; SYN_00965.
KEGGisat:SYN_00965.
PATRICi23862983. VBISynAci70500_1294.

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiMNHFLFP.
OrthoDBiPOG091H0ML3.

Enzyme and pathway databases

BioCyciSACI56780:GHXT-1222-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCHED2_SYNAS
AccessioniPrimary (citable) accession number: Q2LSL4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: February 21, 2006
Last modified: September 7, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.