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Protein

Probable chemoreceptor glutamine deamidase CheD 1

Gene

cheD1

Organism
Syntrophus aciditrophicus (strain SB)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciSACI56780:GHXT-1218-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheD 1UniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheD1UniRule annotation
Ordered Locus Names:SYNAS_11890
ORF Names:SYN_00969
OrganismiSyntrophus aciditrophicus (strain SB)
Taxonomic identifieri56780 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus
Proteomesi
  • UP000001933 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Probable chemoreceptor glutamine deamidase CheD 1PRO_0000251069Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi56780.SYN_00969.

Structurei

3D structure databases

ProteinModelPortaliQ2LSK9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108094. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273195.
KOiK03411.
OMAiGACEEDD.
OrthoDBiPOG091H0ML3.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2LSK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDVIVSISD FRVSNNVGDI LVTYALGSCI AVAIYDPKVK VGGLLHYMLP
60 70 80 90 100
DSSLDVDKAK TTPGMFADTG IPLLFKACYS LGAQKKSMIV KVAGGASILD
110 120 130 140 150
DTNFFRIGQK NIMMARKMFW KNNVLINGED TGSNCNRTVR LEIKTGKVFV
160
KSSGGPLREL
Length:160
Mass (Da):17,312
Last modified:February 21, 2006 - v1
Checksum:i61DFCB3CE48545BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC77068.1.
RefSeqiWP_011417097.1. NC_007759.1.

Genome annotation databases

EnsemblBacteriaiABC77068; ABC77068; SYN_00969.
KEGGisat:SYN_00969.
PATRICi23862975. VBISynAci70500_1290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000252 Genomic DNA. Translation: ABC77068.1.
RefSeqiWP_011417097.1. NC_007759.1.

3D structure databases

ProteinModelPortaliQ2LSK9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi56780.SYN_00969.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC77068; ABC77068; SYN_00969.
KEGGisat:SYN_00969.
PATRICi23862975. VBISynAci70500_1290.

Phylogenomic databases

eggNOGiENOG4108094. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273195.
KOiK03411.
OMAiGACEEDD.
OrthoDBiPOG091H0ML3.

Enzyme and pathway databases

BioCyciSACI56780:GHXT-1218-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCHED1_SYNAS
AccessioniPrimary (citable) accession number: Q2LSK9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: February 21, 2006
Last modified: September 7, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.