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Q2LSK6 (Q2LSK6_SYNAS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SYN_00971 EMBL ABC77066.1
OrganismSyntrophus aciditrophicus (strain SB) [Complete proteome] [HAMAP] EMBL ABC77066.1
Taxonomic identifier56780 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeSyntrophus

Protein attributes

Sequence length648 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2LSK6 [UniParc].

Last modified February 21, 2006. Version 1.
Checksum: EFCD1E1774E2E576

FASTA64868,200
        10         20         30         40         50         60 
MKKRTLEFKL VAGGILLVLI PLLVTGIFST LRSSKALEST AMGQSEQVAK SVGNMVQLVL 

        70         80         90        100        110        120 
QEEIKVATHL ASNNTVIEAA AGVAGKGVDG AAVELTRACS TLGMILKKSG TDYEYIVVTD 

       130        140        150        160        170        180 
SSGKIIADSN GGQLRGMDIS ERDYIKVPKS TGKSHVGEVS KSKATGKPIA PFGAPVYSSS 

       190        200        210        220        230        240 
GQFLGVVGCV ANIDFISDKI GAVKIGETGY AYVLNKEGVV IAHPKADFIL EKNLAKEEGM 

       250        260        270        280        290        300 
VEFAQQMLAR KSGTGKYALA GVEKIGGYAP VELTAWSVGV VQDYEELMAP AVSIRNFMML 

       310        320        330        340        350        360 
ITAAFLALAV VLVLYFARSI SRPIKNAVNT LNDSADQIAS ASMQVSSASQ SLAEGASEQA 

       370        380        390        400        410        420 
SALEETSSSL EEMSSMTKQN AGNASQADSL MRQANQVVQR ANSSMIHLTD SMQQISKASD 

       430        440        450        460        470        480 
ETSKIIKTID EVAFQTNLLA LNAAVEAARA GEAGAGFAVV AEEVRNLAMR AADAARNTAS 

       490        500        510        520        530        540 
LIEGTVKKVK EGSDLVVKTN EAFMEVAESS EKVGGLVSEI AAASNEQAQG IDQVNKAVAE 

       550        560        570        580        590        600 
MDKVTQQTAA NAEESASASE ELNAQAQQMK NISNDLADIV GAVNSSLASS VNGFQAQAAH 

       610        620        630        640 
DSRKGILKKI SALPMSRSIV RSPSPKQKGK EIRPDQIIPL EDDEFKDF 

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References

[1]"The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential."
Gunsalus R., Rohlin L., Kim U., Krupp R., Bhattacharyya A., Campbell J., McInerney M., Moutakki H., Rio-Hernandez L.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SB EMBL ABC77066.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000252 Genomic DNA. Translation: ABC77066.1.
RefSeqYP_461234.1. NC_007759.1.

3D structure databases

ProteinModelPortalQ2LSK6.
SMRQ2LSK6. Positions 357-571.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING56780.SYN_00971.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC77066; ABC77066; SYN_00971.
GeneID3884134.
KEGGsat:SYN_00971.
PATRIC23862971. VBISynAci70500_1288.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148076.
KOK03406.
OMAMYYSYAD.
OrthoDBEOG6MPWTD.

Enzyme and pathway databases

BioCycSACI56780:GHXT-1216-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2LSK6_SYNAS
AccessionPrimary (citable) accession number: Q2LSK6
Entry history
Integrated into UniProtKB/TrEMBL: February 21, 2006
Last sequence update: February 21, 2006
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)