Q2LAF3 (Q2LAF3_PRUPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-polygalacturonase EMBL ABC72324.1

Gene names

Name:

Endo-PG EMBL ABG66443.1

Organism

Prunus persica (Peach) (Amygdalus persica) EMBL ABC72324.1

Taxonomic identifier

3760 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Rosales › Rosaceae › Amygdaloideae › Amygdaleae › Prunus

Protein attributes

Sequence length	393 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation RuleBase RU000404 SAAS SAAS011050
Cellular component	Secreted SAAS SAAS011050
Molecular function	Glycosidase RuleBase RU000404 SAAS SAAS011050 Hydrolase
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	polygalacturonase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2LAF3 [UniParc]. Last modified February 21, 2006. Version 1. Checksum: 1AA5101CCE75F509	FASTA	393	41,258
	10 20 30 40 50 60 MANRRSLFSL SLIFVFMINS AIATPVTYNV ASLGAKADGK TDSTKAFLSA WAKACASMNP 70 80 90 100 110 120 GVIYVPAGTF FLRDVVFSGP CKNNAITFRI AGTLVAPSDY RVIGNAANWI FFHHVNGVTI 130 140 150 160 170 180 SGGILDGQGT ALWACKASHG ESCPSGATTL GFSDSNNIVV SGLASLNSQM FHIVINDCQN 190 200 210 220 230 240 VQMQGVRVSA SGNSPNTDGI HVQMSSGVTI LNSKIATGDD CVSIGPGTSN LWIEGVACGP 250 260 270 280 290 300 GHGISIGSLG KEQEEAGVQN VTVKTVTFSG TQNGLRIKSW GRPSTGFARN ILFQHATMVN 310 320 330 340 350 360 VENPIVIDQH YCPDNKGCPG QVSGVQISDV TYEDIHGTSA TEVAVKFDCS PKHPCSEIKL 370 380 390 EDVKLTYKNQ AAESSCSHAD GTTEGVVQPT SCL

References

[1]

"Changes in endopolygalacturonase levels and characterization of a putative endo-PG gene during fruit softening in peach genotypes with nonmelting and melting flesh fruit phenotypes." Morgutti S., Negrini N., Nocito F.F., Ghiani A., Bassi D., Cocucci M. New Phytol. 171:315-328(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Fruit mesocarp EMBL ABC72324.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DQ340809 mRNA. Translation: ABC72324.1. DQ659241 Genomic DNA. Translation: ABG66443.1.
3D structure databases
ProteinModelPortal	Q2LAF3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	2.160.20.10. 1 hit.
InterPro	IPR000743. Glyco_hydro_28. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Pfam	PF00295. Glyco_hydro_28. 1 hit. [Graphical view]
SMART	SM00710. PbH1. 6 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00502. POLYGALACTURONASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2LAF3_PRUPE

Accession

Primary (citable) accession number: Q2LAF3

Entry history

Integrated into UniProtKB/TrEMBL:	February 21, 2006
Last sequence update:	February 21, 2006
Last modified:	March 6, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)