Unreviewed, UniProtKB/TrEMBL Q2L6J4 (Q2L6J4_HUMAN)

Names and origin

Protein names

Submitted name:
    Ring finger protein 39 EMBL BAE78602.1

Gene names

Name:

RNF39 EMBL BAE78602.1

Organism

Homo sapiens (Human) EMBL BAE78602.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 B30.2/SPRY domain. Spearmint SPM001870 Contains 1 RING-type zinc finger. RuleBase RU000353V2 Spearmint SPM001870

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353V2 Spearmint SPM001870
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Molecular function	protein binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2L6J4-1 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: C4DA5D925AA47DE1	FASTA	420	45,639
	10 20 30 40 50 60 MWWRDLTRLR LWLKREAIPG EGRKAAKVNA GVGEKGIYTA SSRGGPPSAR SKAVTVVAEG 70 80 90 100 110 120 AASRSWLSMD APELGPGLVE RLEQLATCPL CGGSFEDPVL LACEHSFCRA CLARRWGTPP 130 140 150 160 170 180 ATGTEASPTA CPCCGLPCPR RSLRSNVRLA VEVRISRELR EKLAEPGARA GRRRGGRIPT 190 200 210 220 230 240 MGCLDLPGED MRKTWRRFEV PTPKSSNSED DLPEDYPVVK KMLHRLTADL TLDPGTAHRR 250 260 270 280 290 300 LLISADRRSV QLAPPGTPAP PDCPKRFDQL PAVLGAQGFG AGRHCWEVET ADAASCRDSS 310 320 330 340 350 360 GEDEDDEESH YAVGAAGESV QRKGCVRLCP AGAVWAVEGR GGRLWALTAP EPTLLGGVEP 370 380 390 400 410 420 PPRRIRVDLD WERGRVAFYD GRSLDLLYAF QAPGPLGERI FPLFCTCDPR APLRIVPAES

References

[1]

"Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity." Shiina T., Ota M., Shimizu S., Katsuyama Y., Hashimoto N., Takasu M., Anzai T., Kulski J.K., Kikkawa E., Naruse T., Kimura N., Yanagiya K., Watanabe A., Hosomichi K., Kohara S., Iwamoto C., Umehara Y., Meyer A. , Wanner V., Sano K., Macquin C., Ikeo K., Tokunaga K., Gojobori T., Inoko H., Bahram S. Genetics 173:1555-1570(2006) [PubMed: 16702430] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Peripheral blood leukocyte EMBL BAE78602.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB202082 Genomic DNA. Translation: BAE78602.1.
UniGene	Hs.121178
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000206500. Homo sapiens. [Contig view]
Organism-specific databases
HGNC	HGNC:18064. RNF39.
GenAtlas	Search...
GeneCards	Search...
Phylogenomic databases
HOVERGEN	Q2L6J4.
Family and domain databases
InterPro	IPR001870. B302. IPR003879. Butyrophylin. IPR006574. PRY. IPR003877. SPRY_rcpt. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
Pfam	PF00622. SPRY. 1 hit. [Graphical view]
PRINTS	PR01407. BUTYPHLNCDUF.
SMART	SM00589. PRY. 1 hit. SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS50188. B302_SPRY. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]

Entry information

Entry name

Q2L6J4_HUMAN

Accession

Primary (citable) accession number: Q2L6J4

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	November 25, 2008
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)