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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Bordetella avium (strain 197N)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-1224-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:BAV1203Imported
OrganismiBordetella avium (strain 197N)Imported
Taxonomic identifieri360910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000001977 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi360910.BAV1203.

Structurei

3D structure databases

SMRiQ2L2D0. Positions 91-948.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2L2D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTESESLST SYLFGGNAPY VEELYEAYLD NPGSVPDQWR AYFDQLQHSP
60 70 80 90 100
ATDGQETTRD QAHAPVVESF AQRARANAFV QRAAEPDLSV ASKQVSVQSL
110 120 130 140 150
IAAYRSLGSR WADLDPLKRQ ERPPIPELDP AFYGLTEADL DQTYSATNTY
160 170 180 190 200
FTTASTMTLR DILKALRDTY CRSIGAEFMY VSDPAAKRWI QQRLESTLSA
210 220 230 240 250
PAFSPEEKRH ILQQLTESEG LERFLHTKYV GQKRFSLEGG ESFIASMDEV
260 270 280 290 300
VNHAGEAGVQ EIVVGMAHRG RLNLLINIMG KMPGDLFAEF EGKHAEGLTD
310 320 330 340 350
GDVKYHNGFS SDISTRGGPV HLSLAFNPSH LEIVNPVVEG SARARQERRG
360 370 380 390 400
DQEGKQVLPV LVHGDAAFAG QGVVMETLNL AQTRGYGTGG TLHIVINNQI
410 420 430 440 450
GFTTSDPRDS RSTLYCTDVV KMIEAPVFHV NGDDPEAVVF ATRLALDYRM
460 470 480 490 500
QFRHDVVLDI VCFRKLGHNE QDTPSLTQPL MYKRIGHHPG TRKLYADKLT
510 520 530 540 550
TQGVLAEGDA DQMVKDYRQL MEDGQRTIEP VLTDYKSKYA IDWSAFLGAK
560 570 580 590 600
WTDQADTAVP LAELKRIGER ITTVPEGFTV HPLVAKLLND RRNMAKGEQN
610 620 630 640 650
LDWGMGEHLA FATLVASGYA VRITGQDSGR GTFTHRHAVL HDQNRERWND
660 670 680 690 700
GTYIPLQNVS EGQAPFVVID SVLSEEAVLA FEYGYSSAEP NTLTIWEAQF
710 720 730 740 750
GDFVNGAQVV IDQFITAGEA KWGRQSGLTM MLPHGYEGQG PEHSSGRIER
760 770 780 790 800
FLQLCADNNI QVVQPTSASQ IFHLLRRQMI RPFRKPLVIF TPKSLLRNKD
810 820 830 840 850
AGSPLSDLAG GSFRPVIGEV DESIKANSVK RVLACSGKVY YDLVNARRER
860 870 880 890 900
EASNVAIVRV EQLYPFAHKA FETELRKYPK ATEVIWVQDE PQNQGSWFYI
910 920 930 940 950
QHHLYENMSE GQKLGYAGRA ASASPAVGYL AKHQEQQKAL IEQAFTPKFK

GFVLTK
Length:956
Mass (Da):106,519
Last modified:March 7, 2006 - v1
Checksum:iAB0F8A03FBB487D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ48811.1.
RefSeqiWP_012416885.1. NC_010645.1.
YP_785725.1. NC_010645.1.

Genome annotation databases

EnsemblBacteriaiCAJ48811; CAJ48811; BAV1203.
KEGGibav:BAV1203.
PATRICi21128620. VBIBorAvi43433_1234.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ48811.1.
RefSeqiWP_012416885.1. NC_010645.1.
YP_785725.1. NC_010645.1.

3D structure databases

SMRiQ2L2D0. Positions 91-948.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi360910.BAV1203.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ48811; CAJ48811; BAV1203.
KEGGibav:BAV1203.
PATRICi21128620. VBIBorAvi43433_1234.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-1224-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
    Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
    J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 197NImported.

Entry informationi

Entry nameiQ2L2D0_BORA1
AccessioniPrimary (citable) accession number: Q2L2D0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 29, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.