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Protein
Submitted name:

Aromatic-amino-acid aminotransferase

Gene

tyrB

Organism
Bordetella avium (strain 197N)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-1534-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aromatic-amino-acid aminotransferaseImported (EC:2.6.1.57Imported)
Gene namesi
Name:tyrBImported
Ordered Locus Names:BAV1504Imported
OrganismiBordetella avium (strain 197N)Imported
Taxonomic identifieri360910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001977 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi360910.BAV1504.

Structurei

3D structure databases

ProteinModelPortaliQ2L246.
SMRiQ2L246. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 395365Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2L246-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLFASVEL APRDPILGLN EQYNADTRPG KVNLGVGVYY DDEGRIPLLG
60 70 80 90 100
AVRKAELARV EAAAARGYLP IEGIAAYNKG AQALLFGADS TLAAEGRLLT
110 120 130 140 150
TQTLGGTGAL KVGADFLKQL LPQSKVLISD PSWENHRALF ERAGFKVETY
160 170 180 190 200
TYYDAATHGL NFDGMLASLQ AAPEQTIVVL HACCHNPTGV DPTAEQWKQI
210 220 230 240 250
AEVVKARKLV PFLDIAYQGF GENLEKDASV VRLFASMGLT MLISSSFSKS
260 270 280 290 300
FSLYGERVGA LTAVAGDKDE ATRVLSQLKR VIRTNYSNPP THGGSVVAAV
310 320 330 340 350
LNTPALFAEW QQELDAMRDR IRLMRQQLVE KIKAQGVTQD FSFVLQQRGM
360 370 380 390 400
FSYSGLTAAQ VDRLRDEHGV YAVSSGRICV AALNSRNIDT VAAAIAAVLK
Length:400
Mass (Da):43,270
Last modified:March 7, 2006 - v1
Checksum:i73A447FC73E32537
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ49117.1.
RefSeqiWP_012417181.1. NC_010645.1.

Genome annotation databases

EnsemblBacteriaiCAJ49117; CAJ49117; BAV1504.
KEGGibav:BAV1504.
PATRICi21129174. VBIBorAvi43433_1509.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ49117.1.
RefSeqiWP_012417181.1. NC_010645.1.

3D structure databases

ProteinModelPortaliQ2L246.
SMRiQ2L246. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi360910.BAV1504.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ49117; CAJ49117; BAV1504.
KEGGibav:BAV1504.
PATRICi21129174. VBIBorAvi43433_1509.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-1534-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
    Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
    J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 197NImported.

Entry informationi

Entry nameiQ2L246_BORA1
AccessioniPrimary (citable) accession number: Q2L246
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: March 16, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.