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Q2L1N7 (Q2L1N7_BORA1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641 EMBL CAJ47711.1
Ordered Locus Names:BAV0105
OrganismBordetella avium (strain 197N) [Complete proteome] [HAMAP]
Taxonomic identifier360910 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length718 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3331Proton acceptor By similarity HAMAP MF_00641
Active site6261Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q2L1N7 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 12109833E5E87B72

FASTA71878,820
        10         20         30         40         50         60 
MTTRIAGLQV ANSLYQFIEN EALPGSGLDS QTFWEGFAAI IHELGPRNRE LLAERDRLQA 

        70         80         90        100        110        120 
ELDSWHRSHP GPVRDPAAYR AFLRDIGYLQ APPADVRART ENVDHEIARQ AGPQLVVPMS 

       130        140        150        160        170        180 
NARYALNAVN ARWGSLYDAL YGTDAIPGSA GPDYNPQRGQ AVIERARDFL DSAAPLEQGS 

       190        200        210        220        230        240 
HRQAIAYFVR DARLVIATAE GETTLKQAAQ FRGYQGSAAT PQAILLAHNG LHFELQIDRQ 

       250        260        270        280        290        300 
HLIGATDPAG VKDLLMESAL TTIMDCEDSV AAVDAQDKTH IYRNWLGLMR GDLTESVTKN 

       310        320        330        340        350        360 
GKTFTRRMNA DRSYTAADGQ SLTLPGRSLL FVRNVGHLMS NPAILDRDGR EVPEGIMDAV 

       370        380        390        400        410        420 
ITTLAAKVDL AQRRNSRTGS IYIVKPKMHG PAETAFADSL FTRVEDLLRL PRHTIKMGIM 

       430        440        450        460        470        480 
DEERRTSLNL KACIAAAADR VAFINTGFLD RTGDEMHSVM QAGPMLRKGD MKSSAWIAAY 

       490        500        510        520        530        540 
ERNNVLVGLN CGLRGRAQIG KGMWAMPDLM AAMLEQKAAH PKAGANTAWV PSPTAATLHA 

       550        560        570        580        590        600 
LHYHQVDVPA VQRSLEQTRL TEVADELLDG LLTIPVGDPA DWSAQDIQHE LDNNVQGILG 

       610        620        630        640        650        660 
YVVRWIDQGV GCSKVPDINN VGLMEDRATL RISSQHIANW LLHGVVSPDQ VRLTFERMAA 

       670        680        690        700        710 
VVDQQNAGDP GYLPMAGHFT TSYAYRAATA LVFEGLSQPN GYTEPLLHQY RLAFKAAH

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References

[1]"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
J. Bacteriol. 188:6002-6015(2006) [PubMed: 16885469] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM167904 Genomic DNA. Translation: CAJ47711.1.
RefSeqYP_784643.1. NC_010645.1.

3D structure databases

ProteinModelPortalQ2L1N7.
SMRQ2L1N7. Positions 8-718.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2L1N7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6264494.
GenomeReviewsGene locus BAV0105 in contig AM167904_GR.
KEGGbav:BAV0105.
NMPDRfig|521.1.peg.1272.
PATRIC21126338. VBIBorAvi43433_0110.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG350005.
OMAENANWSV.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2L1N7_BORA1
AccessionPrimary (citable) accession number: Q2L1N7
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: December 14, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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