Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Glycolate oxidase subunit

Gene

glcD1

Organism
Bordetella avium (strain 197N)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. UDP-N-acetylmuramate dehydrogenase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-2186-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycolate oxidase subunitImported
Gene namesi
Name:glcD1Imported
Ordered Locus Names:BAV2151Imported
OrganismiBordetella avium (strain 197N)Imported
Taxonomic identifieri360910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000001977: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi360910.BAV2151.

Structurei

3D structure databases

ProteinModelPortaliQ2KZ61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains FAD-binding PCMH-type domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG0277.
HOGENOMiHOG000230998.
KOiK00104.
OMAiLMDRTTI.
OrthoDBiEOG6RZB40.

Family and domain databases

Gene3Di1.10.45.10. 1 hit.
3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR016164. FAD-linked_Oxase-like_C.
IPR004113. FAD-linked_oxidase_C.
IPR006094. Oxid_FAD_bind_N.
IPR016171. Vanillyl_alc_oxidase_C-sub2.
[Graphical view]
PfamiPF02913. FAD-oxidase_C. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF55103. SSF55103. 1 hit.
SSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2KZ61-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTPLIAAGLS PIQAPFSQRE LVQVLRTVLP HHCVLYREED TRPYECDGLS
60 70 80 90 100
LYRALPAVVA LPETEAQVCQ VLRVCKRLNV PLVARGAGTG LSGGAMPHKQ
110 120 130 140 150
GVLLGLSKLN RIKRIDPDAG VAVVEPGVRN LSISEAAAPF GLYYAPDPSS
160 170 180 190 200
QIACSIGGNV AENAGGVHCL KYGLTVHNVL KLRVVTIDGE VVELGGDAPD
210 220 230 240 250
APGPELLPLF IGSEGMLGVV TEVTVKLIPK PACAQVVMAS FASVEAAGNA
260 270 280 290 300
VTQIIAAGII PAGLEMMDRQ ATHMVEPFVQ AGYDLDAQAI LLCESDGTPE
310 320 330 340 350
EVAHEIGRME EVFRAAGATR SQVSESEAER LRFWAGRKNA FPAAGRVSPD
360 370 380 390 400
YYCMDGTIPR RHLAQVLNAI EHMEDEFGLR CANVFHAGDG NLHPLILFDS
410 420 430 440 450
NKPEEVERAD KFGAAILELC VQVGGTVTGE HGVGIEKINQ MCVQFSREEL
460 470 480 490
DAFFEVKRAF DPPGLLNPEK MIPTLARCAE YGKMHVHAGA LRFPDLARF
Length:499
Mass (Da):53,579
Last modified:March 7, 2006 - v1
Checksum:i724DD1E3A85A15DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ49761.1.
RefSeqiWP_012417815.1. NC_010645.1.
YP_786667.1. NC_010645.1.

Genome annotation databases

EnsemblBacteriaiCAJ49761; CAJ49761; BAV2151.
GeneIDi6267073.
KEGGibav:BAV2151.
PATRICi21130507. VBIBorAvi43433_2169.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ49761.1.
RefSeqiWP_012417815.1. NC_010645.1.
YP_786667.1. NC_010645.1.

3D structure databases

ProteinModelPortaliQ2KZ61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi360910.BAV2151.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ49761; CAJ49761; BAV2151.
GeneIDi6267073.
KEGGibav:BAV2151.
PATRICi21130507. VBIBorAvi43433_2169.

Phylogenomic databases

eggNOGiCOG0277.
HOGENOMiHOG000230998.
KOiK00104.
OMAiLMDRTTI.
OrthoDBiEOG6RZB40.

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-2186-MONOMER.

Family and domain databases

Gene3Di1.10.45.10. 1 hit.
3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR016164. FAD-linked_Oxase-like_C.
IPR004113. FAD-linked_oxidase_C.
IPR006094. Oxid_FAD_bind_N.
IPR016171. Vanillyl_alc_oxidase_C-sub2.
[Graphical view]
PfamiPF02913. FAD-oxidase_C. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF55103. SSF55103. 1 hit.
SSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
    Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
    J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 197NImported.

Entry informationi

Entry nameiQ2KZ61_BORA1
AccessioniPrimary (citable) accession number: Q2KZ61
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: February 4, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.