Reviewed, UniProtKB/Swiss-Prot Q2KYQ1 (RPIA_BORA1)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	BAV2246

Organism

Bordetella avium (strain 197N) [Complete proteome] [HAMAP]

Taxonomic identifier

360910 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 224	224	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016904

Sequences

	Sequence		Length	Mass (Da)
	Q2KYQ1-1 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 86B409AE1FBADCAD	FASTA	224	23,550
	10 20 30 40 50 60 MLTQQQLKQQ AADAALEFVE QVAGPDVIIG VGTGSTADLF IDGLARFAGR IRGTVASSER 70 80 90 100 110 120 SAQRLASHGL LVLDLNDVQY MPIYVDGADE IDANLHMIKG GGGALTREKI VASVAERFIC 130 140 150 160 170 180 IADESKLVDR LGAFPLPLEV IPMARAAVAR SLAALGGEPR LREGFVTDNG NIILDVHGLS 190 200 210 220 INDAPALEAR VNNIPGVVTC GLFSLAGADV ALLATQNGIR RLSR

References

[1]

"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction." Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M. J. Bacteriol. 188:6002-6015(2006) [PubMed: 16885469] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM167904 Genomic DNA. Translation: CAJ49856.1.
RefSeq	YP_786760.1.
3D structure databases
SMR	Q2KYQ1. Positions 3-224.
ModBase	Search...
Genome annotation databases
GeneID	6267534.
GenomeReviews	Gene locus BAV2246 in contig AM167904_GR.
KEGG	bav:BAV2246.
NMPDR	fig|521.1.peg.174.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG515603.
OMA	VFDLNSV.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_BORA1

Accession

Primary (citable) accession number: Q2KYQ1

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	March 7, 2006
Last modified:	February 9, 2010
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)