Q2KY51 (Q2KY51_BORA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit 2 HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA4 EMBL CAJ49976.1
Synonyms:	dadA2 HAMAP MF_01202
Ordered Locus Names:	BAV2366

Organism

Bordetella avium (strain 197N) [Complete proteome] [HAMAP]

Taxonomic identifier

360910 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080 EMBL CAJ49976.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	Q2KY51 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: DF09F6D1C2763233	FASTA	418	45,804
	10 20 30 40 50 60 MKVAVLGSGI IGISSAWWLS QAGHEVVVID RSTGPAQETS LANGSQISVS YAEPWANPQA 70 80 90 100 110 120 PLKLLKWMFQ DDAPLLFRPQ LDWRQWMWGL AFLRECLPSR LAPNIRAMVR MAEYSRATLR 130 140 150 160 170 180 GMRADLGIQY DHLERGILNF YRDPQEFETS QRAAGLMRDF GVERRVVNAD EVIAIEPALA 190 200 210 220 230 240 PQRANIVGGD YTPEDESGDV HLFTVGLAQH CEAAGVQFRF CTRITRLLSE GGQVQGVEVI 250 260 270 280 290 300 GPDGRYDRVN ADAFVVALGS YSPHLVRPLG VPCNVYPAKG YSATYPILNP EAAPTVSLTD 310 320 330 340 350 360 SSHKVVFSRL GNRLRMAGTA ELSGYSRELN TGRCAALTAL AREIFPDALD FEGVSYWSGL 370 380 390 400 410 RPSTPSNVPL IGRTRISNLY LNTGHGTLGW TMGVGSGRAL ADLLSGRRPE PEFPFLGL

References

[1]

"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction." Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M. J. Bacteriol. 188:6002-6015(2006) [PubMed: 16885469] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM167904 Genomic DNA. Translation: CAJ49976.1.
RefSeq	YP_786880.1. NC_010645.1.
3D structure databases
ProteinModelPortal	Q2KY51.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2KY51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6265940.
GenomeReviews	Gene locus BAV2366 in contig AM167904_GR.
KEGG	bav:BAV2366.
NMPDR	fig|521.1.peg.98.
PATRIC	21130967. VBIBorAvi43433_2391.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	WANPGAP.
ProtClustDB	CLSK920503.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 3 hits.
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2KY51_BORA1

Accession

Primary (citable) accession number: Q2KY51

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)