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Q2KWK3 (Q2KWK3_BORA1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpiA HAMAP-Rule MF_00147 EMBL CAJ50269.1
Ordered Locus Names:BAV2659
OrganismBordetella avium (strain 197N) [Complete proteome] [HAMAP]
Taxonomic identifier360910 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella ›

Protein attributes

Sequence length249 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1001Electrophile By similarity HAMAP-Rule MF_00147
Active site1711Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site151Substrate By similarity HAMAP-Rule MF_00147
Binding site171Substrate By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
Q2KWK3 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 7B2E52E0281A0418

FASTA24925,554
        10         20         30         40         50         60 
MTETANRRSR LVLGNWKMHG SLAENASLLA ALRAADPALH CEIGVCVPFP YLAQASAALS 

        70         80         90        100        110        120 
GSAISWGAQD VSAQAKGAFT GEVSASMLKD FGSRWALAGH SERRTLHGET DQEVADKARA 

       130        140        150        160        170        180 
ALAAGLRPVV CVGESLAERE AGQTLAIIER QLAPVLALGR EAVAGMVLAY EPVWAIGTGL 

       190        200        210        220        230        240 
SATPEQAQEV HAAIRAALAG LGATQVQVLY GGSVKAANAA SLFAMADIDG ALVGGASLVA 


EEFLRIAAN

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References

[1]"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 197N.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM167904 Genomic DNA. Translation: CAJ50269.1.
RefSeqYP_787157.1. NC_010645.1.

3D structure databases

ProteinModelPortalQ2KWK3.
ModBaseSearch...

Protein-protein interaction databases

STRING360910.BAV2659.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6267750.
KEGGbav:BAV2659.
PATRIC21131593. VBIBorAvi43433_2689.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0149.
HOGENOMHOG000226413.
KOK01803.
OMAANTVIAY.
ProtClustDBPRK00042.

Enzyme and pathway databases

UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2KWK3_BORA1
AccessionPrimary (citable) accession number: Q2KWK3
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info