Q2KV52 (Q2KV52_BORA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Membrane-bound lytic murein transglycosylase D EMBL CAJ50547.1
EC=3.2.1.- EMBL CAJ50547.1

Gene names

Name:	mltD EMBL CAJ50547.1
Ordered Locus Names:	BAV2937

Organism

Bordetella avium (strain 197N) [Complete proteome] [HAMAP]

Taxonomic identifier

360910 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAJ50547.1
Molecular function	Glycosidase EMBL CAJ50547.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on glycosyl bonds Inferred from electronic annotation. Source: UniProtKB-KW lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL CAJ50547.1
	Chain	25 – 466	442	Potential EMBL CAJ50547.1		PRO_5000077527

Sequences

	Sequence		Length	Mass (Da)
	Q2KV52 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 40CFC30D694A3E45	FASTA	466	51,217
	10 20 30 40 50 60 MSLFRLLFPV LLIVLAGCAG SGQKQNADGS SSTRYVAKDT SRTVDLTSPP RDAWDRIRRG 70 80 90 100 110 120 FAIPNLNTEL SQQWTDYYAA HPDSVQRMAE RAGKYLYFIV DEVNRRGLPT ELALLPFVES 130 140 150 160 170 180 AYNPTALSRA QASGLWQFVP ATGQHFNLKQ DWWRDQRRDP IASTYAALDY LEKLFEMQGD 190 200 210 220 230 240 WYLALASYNW GEGSVQRAMA KNEAAGLPTD YLSLSMPDET RNYVPKLQAI KNIIADPKKY 250 260 270 280 290 300 AVALPKVDNS PYFVTVQKNR DIDIELAAKF AEMPLDEFKA LNPSFNRPLI RGEHAPTLLL 310 320 330 340 350 360 PADRLATFNA NMQNYKGDLS TWSTYTSRRG ESYAAIAKRH GVTEARLRQI NELGAKQKVA 370 380 390 400 410 420 SGQVLLVPAG PEKPAAESVQ LASLATPVGA LTPPATAKPG PRALPSAARV AQPNVRTHKV 430 440 450 460 GAGDTLFSLA KRYGTSVDAL RALNNLKGNS LKIGTPLRVP GTGTRG

References

[1]

"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction." Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M. J. Bacteriol. 188:6002-6015(2006) [PubMed: 16885469] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM167904 Genomic DNA. Translation: CAJ50547.1.
RefSeq	YP_787432.1. NC_010645.1.
3D structure databases
ProteinModelPortal	Q2KV52.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2KV52.
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6267092.
GenomeReviews	Gene locus BAV2937 in contig AM167904_GR.
KEGG	bav:BAV2937.
NMPDR	fig|521.1.peg.2540.
PATRIC	21132183. VBIBorAvi43433_2971.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG519241.
OMA	SLYLHYI.
ProtClustDB	CLSK920984.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2KV52_BORA1

Accession

Primary (citable) accession number: Q2KV52

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)