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Protein
Submitted name:

Outer membrane protein

Gene

tolC

Organism
Bordetella avium (strain 197N)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-3146-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Outer membrane proteinImported
Gene namesi
Name:tolCImported
Ordered Locus Names:BAV3072Imported
OrganismiBordetella avium (strain 197N)Imported
Taxonomic identifieri360910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000001977 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi360910.BAV3072.

Structurei

3D structure databases

ProteinModelPortaliQ2KUH8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1538.
HOGENOMiHOG000283505.
KOiK12340.
OMAiFATENRI.
OrthoDBiEOG6JHRGC.

Family and domain databases

InterProiIPR003423. OMP_efflux.
IPR010130. T1SS_OMP_TolC.
[Graphical view]
PANTHERiPTHR30026:SF3. PTHR30026:SF3. 1 hit.
PfamiPF02321. OEP. 2 hits.
[Graphical view]
TIGRFAMsiTIGR01844. type_I_sec_TolC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2KUH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVRSLAAVL SLFCAAAAGV PAQAQDLMQV WREALARDPV YAAARAAYRA
60 70 80 90 100
NAEKLPQARA GLLPLVSGST SGVYNEARST RGLSYDHSGS RGTWDLSLTQ
110 120 130 140 150
PLFDWARWQR FEQSKLVVAD GEVQLQQSLQ GLVLRVADAY FGILRAQDAL
160 170 180 190 200
TATEAEKAAV AEQLAAAHRR FELGNATITD TYEAQARYDL VSAEELRLQN
210 220 230 240 250
EVQNQRDQLA KITGSPPGAL AELPHGVSLP APQPARLSDW SQQAQEASLE
260 270 280 290 300
VLRAQLQTRI AGSDIEIARS GHYPTLNLRA SSGSASDGSL RNGGAGRPID
310 320 330 340 350
NSVGLTLSIP IYSGGGISSQ VSEKVQLEQK ARQDYENAKR ESLRATQQYF
360 370 380 390 400
NGVLTGLARV RALEAGEISS RNALQANQTG YELGVRINLD VLNAQQQLYA
410 420 430 440
TQRDLAQARY LTLLDGLRLK ASSGSLNEND LDAINRLLRL P
Length:441
Mass (Da):47,788
Last modified:March 7, 2006 - v1
Checksum:i6367EB8B135D8F60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ50682.1.
RefSeqiWP_012418710.1. NC_010645.1.

Genome annotation databases

EnsemblBacteriaiCAJ50682; CAJ50682; BAV3072.
KEGGibav:BAV3072.
PATRICi21132457. VBIBorAvi43433_3107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM167904 Genomic DNA. Translation: CAJ50682.1.
RefSeqiWP_012418710.1. NC_010645.1.

3D structure databases

ProteinModelPortaliQ2KUH8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi360910.BAV3072.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ50682; CAJ50682; BAV3072.
KEGGibav:BAV3072.
PATRICi21132457. VBIBorAvi43433_3107.

Phylogenomic databases

eggNOGiCOG1538.
HOGENOMiHOG000283505.
KOiK12340.
OMAiFATENRI.
OrthoDBiEOG6JHRGC.

Enzyme and pathway databases

BioCyciBAVI360910:GCKI-3146-MONOMER.

Family and domain databases

InterProiIPR003423. OMP_efflux.
IPR010130. T1SS_OMP_TolC.
[Graphical view]
PANTHERiPTHR30026:SF3. PTHR30026:SF3. 1 hit.
PfamiPF02321. OEP. 2 hits.
[Graphical view]
TIGRFAMsiTIGR01844. type_I_sec_TolC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
    Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
    J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 197NImported.

Entry informationi

Entry nameiQ2KUH8_BORA1
AccessioniPrimary (citable) accession number: Q2KUH8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.