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Q2KUH8 (Q2KUH8_BORA1) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:tolC EMBL CAJ50682.1
Ordered Locus Names:BAV3072 EMBL CAJ50682.1
OrganismBordetella avium (strain 197N) [Complete proteome] [HAMAP] EMBL CAJ50682.1
Taxonomic identifier360910 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAJ50682.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processprotein transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentouter membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – ›23›23 Potential EMBL CAJ50682.1
Chain24 – 441418 Potential EMBL CAJ50682.1
PRO_5001167659

Sequences

Sequence LengthMass (Da)Tools
Q2KUH8 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 6367EB8B135D8F60

FASTA44147,788
        10         20         30         40         50         60 
MRVRSLAAVL SLFCAAAAGV PAQAQDLMQV WREALARDPV YAAARAAYRA NAEKLPQARA 

        70         80         90        100        110        120 
GLLPLVSGST SGVYNEARST RGLSYDHSGS RGTWDLSLTQ PLFDWARWQR FEQSKLVVAD 

       130        140        150        160        170        180 
GEVQLQQSLQ GLVLRVADAY FGILRAQDAL TATEAEKAAV AEQLAAAHRR FELGNATITD 

       190        200        210        220        230        240 
TYEAQARYDL VSAEELRLQN EVQNQRDQLA KITGSPPGAL AELPHGVSLP APQPARLSDW 

       250        260        270        280        290        300 
SQQAQEASLE VLRAQLQTRI AGSDIEIARS GHYPTLNLRA SSGSASDGSL RNGGAGRPID 

       310        320        330        340        350        360 
NSVGLTLSIP IYSGGGISSQ VSEKVQLEQK ARQDYENAKR ESLRATQQYF NGVLTGLARV 

       370        380        390        400        410        420 
RALEAGEISS RNALQANQTG YELGVRINLD VLNAQQQLYA TQRDLAQARY LTLLDGLRLK 

       430        440 
ASSGSLNEND LDAINRLLRL P 

« Hide

References

[1]"Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction."
Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D., Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A., Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J., Parkhill J., Temple L.M.
J. Bacteriol. 188:6002-6015(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 197N EMBL CAJ50682.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM167904 Genomic DNA. Translation: CAJ50682.1.
RefSeqYP_787567.1. NC_010645.1.

3D structure databases

ProteinModelPortalQ2KUH8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360910.BAV3072.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6267491.
KEGGbav:BAV3072.
PATRIC21132457. VBIBorAvi43433_3107.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1538.
HOGENOMHOG000283505.
KOK12340.
OMAGHARENN.
OrthoDBEOG6JHRGC.
ProtClustDBCLSK921555.

Enzyme and pathway databases

BioCycBAVI360910:GCKI-3146-MONOMER.

Family and domain databases

InterProIPR003423. OMP_efflux.
IPR010130. T1SS_OMP_TolC.
[Graphical view]
PfamPF02321. OEP. 2 hits.
[Graphical view]
TIGRFAMsTIGR01844. type_I_sec_TolC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2KUH8_BORA1
AccessionPrimary (citable) accession number: Q2KUH8
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: December 11, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)