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Protein

28S ribosomal protein S5, mitochondrial

Gene

MRPS5

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • poly(A) RNA binding Source: Ensembl
  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S5, mitochondrial
Short name:
MRP-S5
Short name:
S5mt
Gene namesi
Name:MRPS5
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 11

Subcellular locationi

GO - Cellular componenti

  • mitochondrial inner membrane Source: Reactome
  • mitochondrial small ribosomal subunit Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002403021 – 43028S ribosomal protein S5, mitochondrialAdd BLAST430

Proteomic databases

PaxDbiQ2KID9.
PRIDEiQ2KID9.

Expressioni

Gene expression databases

BgeeiENSBTAG00000008241.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.1 Publication

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000010843.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JD5electron microscopy7.00E1-430[»]
ProteinModelPortaliQ2KID9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini218 – 282S5 DRBMPROSITE-ProRule annotationAdd BLAST65

Sequence similaritiesi

Belongs to the ribosomal protein S5P family.Curated
Contains 1 S5 DRBM domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2646. Eukaryota.
COG0098. LUCA.
GeneTreeiENSGT00390000001878.
HOGENOMiHOG000231482.
HOVERGENiHBG030178.
InParanoidiQ2KID9.
KOiK02988.
OMAiIRMKKQN.
OrthoDBiEOG091G09JG.
TreeFamiTF313823.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
InterProiIPR014720. dsRBD_dom.
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2KID9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAVRAAGF LPALCGASAG RLWSRQLYLN TFPTASIWAL KAVPSNGPSS
60 70 80 90 100
SAGARGRCRS THLGPALQTQ CCTPAPGNVT AQQYRSYSFF TKLTADELWK
110 120 130 140 150
GALAETGAGA RKGRGKRTKR KRRKDLNRGQ IIGEGRRGFL WPGLNAPLMK
160 170 180 190 200
SGAIQTITQR SKEEQEKVEA DMVQQREEWD RKRKMKVKRE RGWSGNSWGG
210 220 230 240 250
ISLGPPDPGP NGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG
260 270 280 290 300
RGAAGFAIGK ATERADAFRK AKNRAVHYLH YIERYEDHTI YHDISLTFKR
310 320 330 340 350
THIKMKKQPR GYGLRCHRAI TTICRLIGIK DMYAKVSGSV NMLSLTRGLF
360 370 380 390 400
QGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPQGA LRKDPEPEDE
410 420 430
VPDIKLDWDD VKAVQGMKRS VWSGLKRAAT
Length:430
Mass (Da):47,872
Last modified:March 7, 2006 - v1
Checksum:i5E379D33F4DA493F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti405K → Q AA sequence (PubMed:11344316).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112674 mRNA. Translation: AAI12675.1.
RefSeqiNP_001039588.1. NM_001046123.2.
UniGeneiBt.4900.

Genome annotation databases

EnsembliENSBTAT00000010843; ENSBTAP00000010843; ENSBTAG00000008241.
GeneIDi512469.
KEGGibta:512469.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112674 mRNA. Translation: AAI12675.1.
RefSeqiNP_001039588.1. NM_001046123.2.
UniGeneiBt.4900.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JD5electron microscopy7.00E1-430[»]
ProteinModelPortaliQ2KID9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000010843.

Proteomic databases

PaxDbiQ2KID9.
PRIDEiQ2KID9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000010843; ENSBTAP00000010843; ENSBTAG00000008241.
GeneIDi512469.
KEGGibta:512469.

Organism-specific databases

CTDi64969.

Phylogenomic databases

eggNOGiKOG2646. Eukaryota.
COG0098. LUCA.
GeneTreeiENSGT00390000001878.
HOGENOMiHOG000231482.
HOVERGENiHBG030178.
InParanoidiQ2KID9.
KOiK02988.
OMAiIRMKKQN.
OrthoDBiEOG091G09JG.
TreeFamiTF313823.

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Gene expression databases

BgeeiENSBTAG00000008241.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
InterProiIPR014720. dsRBD_dom.
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRT05_BOVIN
AccessioniPrimary (citable) accession number: Q2KID9
Secondary accession number(s): P82674
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: March 7, 2006
Last modified: October 5, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.