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Protein

28S ribosomal protein S5, mitochondrial

Gene

MRPS5

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: Ensembl
  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S5, mitochondrial
Short name:
MRP-S5
Short name:
S5mt
Gene namesi
Name:MRPS5
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002403021 – 43028S ribosomal protein S5, mitochondrialAdd BLAST430

Proteomic databases

PaxDbiQ2KID9.
PRIDEiQ2KID9.

Expressioni

Gene expression databases

BgeeiENSBTAG00000008241.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.2 Publications

Protein-protein interaction databases

CORUMiQ2KID9.
STRINGi9913.ENSBTAP00000010843.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JD5electron microscopy7.00E1-430[»]
ProteinModelPortaliQ2KID9.
SMRiQ2KID9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini218 – 282S5 DRBMPROSITE-ProRule annotationAdd BLAST65

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2646. Eukaryota.
COG0098. LUCA.
GeneTreeiENSGT00390000001878.
HOGENOMiHOG000231482.
HOVERGENiHBG030178.
InParanoidiQ2KID9.
KOiK02988.
OMAiLWPGLNA.
OrthoDBiEOG091G09JG.
TreeFamiTF313823.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
InterProiView protein in InterPro
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiView protein in Pfam
PF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiView protein in PROSITE
PS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2KID9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAVRAAGF LPALCGASAG RLWSRQLYLN TFPTASIWAL KAVPSNGPSS
60 70 80 90 100
SAGARGRCRS THLGPALQTQ CCTPAPGNVT AQQYRSYSFF TKLTADELWK
110 120 130 140 150
GALAETGAGA RKGRGKRTKR KRRKDLNRGQ IIGEGRRGFL WPGLNAPLMK
160 170 180 190 200
SGAIQTITQR SKEEQEKVEA DMVQQREEWD RKRKMKVKRE RGWSGNSWGG
210 220 230 240 250
ISLGPPDPGP NGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG
260 270 280 290 300
RGAAGFAIGK ATERADAFRK AKNRAVHYLH YIERYEDHTI YHDISLTFKR
310 320 330 340 350
THIKMKKQPR GYGLRCHRAI TTICRLIGIK DMYAKVSGSV NMLSLTRGLF
360 370 380 390 400
QGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPQGA LRKDPEPEDE
410 420 430
VPDIKLDWDD VKAVQGMKRS VWSGLKRAAT
Length:430
Mass (Da):47,872
Last modified:March 7, 2006 - v1
Checksum:i5E379D33F4DA493F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti405K → Q AA sequence (PubMed:11344316).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112674 mRNA. Translation: AAI12675.1.
RefSeqiNP_001039588.1. NM_001046123.2.
UniGeneiBt.4900.

Genome annotation databases

EnsembliENSBTAT00000010843; ENSBTAP00000010843; ENSBTAG00000008241.
GeneIDi512469.
KEGGibta:512469.

Similar proteinsi

Entry informationi

Entry nameiRT05_BOVIN
AccessioniPrimary (citable) accession number: Q2KID9
Secondary accession number(s): P82674
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: March 7, 2006
Last modified: September 27, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families