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Q2KIB9

- RPP29_BOVIN

UniProt

Q2KIB9 - RPP29_BOVIN

Protein

Ribonuclease P protein subunit p29

Gene

POP4

Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. May function with RPP38 to coordinate the nucleolar targeting and/or assembly of RNase P By similarity.By similarity

    Catalytic activityi

    Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

    GO - Molecular functioni

    1. ribonuclease P activity Source: UniProtKB-EC
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. mRNA cleavage Source: InterPro
    2. rRNA processing Source: InterPro
    3. tRNA processing Source: UniProtKB-KW

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    tRNA processing

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribonuclease P protein subunit p29 (EC:3.1.26.5)
    Gene namesi
    Name:POP4
    Synonyms:RPP29
    OrganismiBos taurus (Bovine)
    Taxonomic identifieri9913 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
    ProteomesiUP000009136: Unplaced

    Subcellular locationi

    Nucleusnucleolus By similarity

    GO - Cellular componenti

    1. nucleolar ribonuclease P complex Source: InterPro
    2. ribonuclease MRP complex Source: InterPro

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 220220Ribonuclease P protein subunit p29PRO_0000236680Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei10 – 101PhosphoserineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Interactioni

    Subunit structurei

    Component of nuclear RNase P and RNase MRP ribonucleoproteins. RNase P consists of an RNA moiety and at least 8 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38 and RPP40. RNase MRP consists of an RNA moiety and at least 9 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38, RPP40, POP5 and RPP21. Interacts with RPP25 and POP5 By similarity.By similarity

    Protein-protein interaction databases

    STRINGi9913.ENSBTAP00000002876.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2KIB9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiNOG255667.
    HOGENOMiHOG000007746.
    HOVERGENiHBG002676.
    InParanoidiQ2KIB9.
    KOiK03538.

    Family and domain databases

    Gene3Di2.30.30.210. 1 hit.
    InterProiIPR002730. RNase_P/MRP_p29.
    IPR016848. RNase_P/MRP_p29-subunit.
    IPR023534. Rof/RNase_P-like.
    [Graphical view]
    PfamiPF01868. UPF0086. 1 hit.
    [Graphical view]
    PIRSFiPIRSF027081. RNase_P/MRP_p29_subunit. 1 hit.
    SMARTiSM00538. POP4. 1 hit.
    [Graphical view]
    SUPFAMiSSF101744. SSF101744. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2KIB9-1 [UniParc]FASTAAdd to Basket

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    MTSVVYHAFS QKEAKELDVQ HSGAQRAEAF VRAFLKRSMP RMSQQALEDH    50
    LQRKAVVLEY FTHRKQKEKR KKSKGLSAKQ RRELRLFDIK PEQQRYSLFL 100
    PLHELWKQYI RDLCNGLKPD TQPQMIQAKL LKADLHGAIV SVTKSKCPSY 150
    VGVTGILLQE TKHVFKIITK EDRLKVIPKL NCVFTVEIDG FISYIYGSKF 200
    QLRSSERSAK KFKAKGTIDL 220
    Length:220
    Mass (Da):25,524
    Last modified:March 7, 2006 - v1
    Checksum:i0F9F42C93BD1D627
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC112695 mRNA. Translation: AAI12696.1.
    RefSeqiNP_001106753.1. NM_001113282.2.
    UniGeneiBt.21490.

    Genome annotation databases

    GeneIDi614870.
    KEGGibta:614870.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC112695 mRNA. Translation: AAI12696.1 .
    RefSeqi NP_001106753.1. NM_001113282.2.
    UniGenei Bt.21490.

    3D structure databases

    ProteinModelPortali Q2KIB9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9913.ENSBTAP00000002876.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 614870.
    KEGGi bta:614870.

    Organism-specific databases

    CTDi 10775.

    Phylogenomic databases

    eggNOGi NOG255667.
    HOGENOMi HOG000007746.
    HOVERGENi HBG002676.
    InParanoidi Q2KIB9.
    KOi K03538.

    Miscellaneous databases

    NextBioi 20899328.

    Family and domain databases

    Gene3Di 2.30.30.210. 1 hit.
    InterProi IPR002730. RNase_P/MRP_p29.
    IPR016848. RNase_P/MRP_p29-subunit.
    IPR023534. Rof/RNase_P-like.
    [Graphical view ]
    Pfami PF01868. UPF0086. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF027081. RNase_P/MRP_p29_subunit. 1 hit.
    SMARTi SM00538. POP4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101744. SSF101744. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Mammalian Gene Collection (MGC) project
      Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: Hereford.
      Tissue: Hypothalamus.

    Entry informationi

    Entry nameiRPP29_BOVIN
    AccessioniPrimary (citable) accession number: Q2KIB9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3