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Q2KDX6 (Q2KDX6_RHIEC) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RHE_CH00135 EMBL ABC88960.1
OrganismRhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP] EMBL ABC88960.1
Taxonomic identifier347834 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length330 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding245 – 2506ADP PDB 4K8C

Sites

Metal binding2721Potassium; via carbonyl oxygen PDB 4LCA PDB 4LC4 PDB 4LBG PDB 4K8K PDB 4K8C PDB 4K8P PDB 4K8T PDB 4K93 PDB 4K9C PDB 4K9I PDB 4KAD PDB 4KAH PDB 4KAL PDB 4KAN PDB 4KBE PDB 4LBX
Metal binding2741Potassium; via carbonyl oxygen PDB 4LCA PDB 4LC4 PDB 4LBG PDB 4K8K PDB 4K8C PDB 4K8P PDB 4K8T PDB 4K93 PDB 4K9C PDB 4K9I PDB 4KAD PDB 4KAH PDB 4KAL PDB 4KAN PDB 4KBE PDB 4LBX
Metal binding3081Potassium; via carbonyl oxygen PDB 4LCA PDB 4LC4 PDB 4LBG PDB 4K8K PDB 4K8C PDB 4K8P PDB 4K8T PDB 4K93 PDB 4K9C PDB 4K9I PDB 4KAD PDB 4KAH PDB 4KAL PDB 4KAN PDB 4KBE PDB 4LBX
Metal binding3111Potassium; via carbonyl oxygen PDB 4LCA PDB 4LC4 PDB 4LBG PDB 4K8K PDB 4K8C PDB 4K8P PDB 4K8T PDB 4K93 PDB 4K9C PDB 4K9I PDB 4KAD PDB 4KAH PDB 4KAL PDB 4KAN PDB 4KBE PDB 4LBX
Metal binding3131Potassium; via carbonyl oxygen PDB 4LCA PDB 4LC4 PDB 4LBG PDB 4K8K PDB 4K8C PDB 4K8P PDB 4K8T PDB 4K93 PDB 4K9C PDB 4K9I PDB 4KAD PDB 4KAH PDB 4KAL PDB 4KAN PDB 4KBE PDB 4LBX
Binding site2151ADP PDB 4K8C
Binding site2771ADP; via amide nitrogen PDB 4K8C

Sequences

Sequence LengthMass (Da)Tools
Q2KDX6 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: F539E20DAB47EB4B

FASTA33035,739
        10         20         30         40         50         60 
MTRFDVLTVG NAIVDIISRC NDQFLIDNQI TKAAMNLIDA ERAELLYSRM GPALEASGGS 

        70         80         90        100        110        120 
AGNTAAGVAN LGGKAAYFGN VAADQLGDIF THDIRAQGVH YQTKPKGAFP PTARSMIFVT 

       130        140        150        160        170        180 
EDGERSMNTY LGACVELGPE DVEADVVADA KVTYFEGYLW DPPRAKEAIL DCARIAHQHG 

       190        200        210        220        230        240 
REMSMTLSDS FCVDRYRGEF LDLMRSGKVD IVFANRQEAL SLYQTDDFEE ALNRIAADCK 

       250        260        270        280        290        300 
IAAVTMSENG AVILKGRERY YVNAIRIREV VDTTGAGDLF ASGFLYGYTQ GRSLEDCGKL 

       310        320        330 
GCLAAGIVIQ QIGPRPMTSL SEAAKQAGLI 

« Hide

References

« Hide 'large scale' references
[1]"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons."
Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G.
Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CFN 42 / ATCC 51251.
[2]"CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Zenchek W., Love J. expand/collapse author list , Fiser A., Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (MAR-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.63 ANGSTROMS).
[3]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with DMSO, NYSGRC Target 14306."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (MAR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.51 ANGSTROMS).
[4]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with quinaldic acid, NYSGRC Target 14306."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (MAR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.51 ANGSTROMS).
[5]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 1-(4-methoxyphenyl)-1-cyclopropane and 2-aminoperimidine."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[6]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 2-(2,5-dimethyl-1,3-thiazol-4-yl)acetic acid."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.51 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[7]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 2-ethylbenzyl alcohol."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[8]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 4-bromo-1H-pyrazole."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[9]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with ADP."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.51 ANGSTROMS) IN COMPLEX WITH ADP AND POTASSIUM.
[10]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with benzoguanamine."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[11]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with ethyl 3,4-diaminobenzoate."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[12]"CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE and 4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-CARBOXYLIC ACID."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[13]"CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[14]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N1-(2.3-dihydro-1H-inden-5-yl)acetam."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[15]"CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with Norharmane."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[16]"Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with quinoline-3-carboxylic acid."
Malashkevich V.N., Bhosle R., Toro R., Seidel R., Almo S.C.
Submitted (APR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[17]"Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with adenosine."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (JUN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[18]"Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with cytidine."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (JUN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[19]"Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with guanosine."
Malashkevich v.n., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (JUN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH POTASSIUM.
[20]"Crystal structure of probable sugar kinase protein from Rhizobium Etli CFN 42 complexed with thymidine."
Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Love J., Fiser A. expand/collapse author list , Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
Submitted (JUN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH POTASSIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000133 Genomic DNA. Translation: ABC88960.1.
RefSeqYP_467687.1. NC_007761.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4E3AX-ray1.63A/B1-330[»]
4JKSX-ray1.51A/B1-330[»]
4JKUX-ray1.51A/B1-330[»]
4K8CX-ray1.51A/B1-330[»]
4K8KX-ray1.50A/B1-330[»]
4K8PX-ray1.50A/B1-330[»]
4K8TX-ray1.70A/B1-330[»]
4K93X-ray1.50A/B1-330[»]
4K9CX-ray1.50A/B1-330[»]
4K9IX-ray1.70A/B1-330[»]
4KADX-ray1.70A/B1-330[»]
4KAHX-ray1.80A/B1-330[»]
4KALX-ray1.50A/B1-330[»]
4KANX-ray1.51A/B1-330[»]
4KBEX-ray1.80A/B1-330[»]
4LBGX-ray1.50A/B1-330[»]
4LBXX-ray1.70A/B1-330[»]
4LC4X-ray1.70A/B1-330[»]
4LCAX-ray1.50A/B1-330[»]
ProteinModelPortalQ2KDX6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING347834.RHE_CH00135.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC88960; ABC88960; RHE_CH00135.
GeneID3893107.
KEGGret:RHE_CH00135.
PATRIC23081562. VBIRhiEtl108884_0467.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0524.
HOGENOMHOG000235949.
OMARTMCTYL.
OrthoDBEOG6FV82S.
ProtClustDBCLSK864259.

Enzyme and pathway databases

BioCycRETL347834:GJJ0-136-MONOMER.

Family and domain databases

InterProIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011611. PfkB_dom.
[Graphical view]
PfamPF00294. PfkB. 1 hit.
[Graphical view]
PROSITEPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2KDX6_RHIEC
AccessionPrimary (citable) accession number: Q2KDX6
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: February 19, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)