Q2KDJ1 (Q2KDJ1_RHIEC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable oxidoreductase protein EMBL ABC89095.1

Gene names

Ordered Locus Names:

RHE_CH00272 EMBL ABC89095.1

Organism

Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP] EMBL ABC89095.1

Taxonomic identifier

347834 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium etli

Protein attributes

Sequence length	328 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4HAD Complete proteome
Gene Ontology (GO)
Molecular_function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2KDJ1 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: AD102DCC4045DE13	FASTA	328	36,767
	10 20 30 40 50 60 MLRFGIISTA KIGRDNVVPA IQDAENCVVT AIASRDLTRA REMADRFSVP HAFGSYEEML 70 80 90 100 110 120 ASDVIDAVYI PLPTSQHIEW SIKAADAGKH VVCEKPLALK AGDIDAVIAA RDRNKVVVTE 130 140 150 160 170 180 AYMITYSPVW QKVRSLIDEG AIGSLRHVQG AFTYFNRDAS NMRNIPELGG GGLPDIGVYP 190 200 210 220 230 240 VMSTRFSTGK EPLRIQANTE RDPDFGTDIY SSVKADFDDF ELSFYVSTQM ANRQIMVFHG 250 260 270 280 290 300 TNGYIEVKSP FNANRWGPEE IELADRSHNE SRIFRFQDSR QYRREVEAFA RAVENGKEEV 310 320 VTLENSKLNQ KVIDAIYRAS EKDGWEAV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CFN 42 / ATCC 51251.
[2]	"Crystal structure of probable oxidoreductase protein from Rhizobium etli CFN 42." Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Zenchek W., Love J. , Fiser A., Khafizov K., Seidel R., Bonanno J.B., Almo S.C. Submitted (SEP-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000133 Genomic DNA. Translation: ABC89095.1.

RefSeq

YP_467822.1. NC_007761.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4HAD	X-ray	2.00	A/B/C/D	1-328	[»]

ProteinModelPortal

Q2KDJ1.

ModBase

Search...

Protein-protein interaction databases

STRING

347834.RHE_CH00272.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

ABC89095; ABC89095; RHE_CH00272.

GeneID

3890990.

KEGG

ret:RHE_CH00272.

PATRIC

23081834. VBIRhiEtl108884_0601.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

COG0673.

OMA

WGPEEIE.

ProtClustDB

CLSK864173.

Enzyme and pathway databases

BioCyc

RETL347834:GJJ0-274-MONOMER.

Family and domain databases

Gene3D

3.40.50.720. 1 hit.

InterPro

IPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]

Pfam

PF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q2KDJ1_RHIEC

Accession

Primary (citable) accession number: Q2KDJ1

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 29, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)