SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q2KDJ1

- Q2KDJ1_RHIEC

UniProt

Q2KDJ1 - Q2KDJ1_RHIEC

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Probable oxidoreductase protein

Gene
RHE_CH00272
Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi21 – 211Sodium; via carbonyl oxygenImported
Metal bindingi22 – 221SodiumImported
Metal bindingi24 – 241Sodium; via carbonyl oxygenImported
Metal bindingi27 – 271Sodium; via carbonyl oxygenImported
Metal bindingi46 – 461Sodium; via carbonyl oxygenImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. oxidoreductase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-bindingImported, SodiumImported

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-274-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable oxidoreductase proteinImported
Gene namesi
Ordered Locus Names:RHE_CH00272Imported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000001936: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_CH00272.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HADX-ray2.00A/B/C/D1-328[»]
ProteinModelPortaliQ2KDJ1.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0673.
OMAiTAKIGRD.
OrthoDBiEOG65F90G.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2KDJ1-1 [UniParc]FASTAAdd to Basket

« Hide

MLRFGIISTA KIGRDNVVPA IQDAENCVVT AIASRDLTRA REMADRFSVP    50
HAFGSYEEML ASDVIDAVYI PLPTSQHIEW SIKAADAGKH VVCEKPLALK 100
AGDIDAVIAA RDRNKVVVTE AYMITYSPVW QKVRSLIDEG AIGSLRHVQG 150
AFTYFNRDAS NMRNIPELGG GGLPDIGVYP VMSTRFSTGK EPLRIQANTE 200
RDPDFGTDIY SSVKADFDDF ELSFYVSTQM ANRQIMVFHG TNGYIEVKSP 250
FNANRWGPEE IELADRSHNE SRIFRFQDSR QYRREVEAFA RAVENGKEEV 300
VTLENSKLNQ KVIDAIYRAS EKDGWEAV 328
Length:328
Mass (Da):36,767
Last modified:March 7, 2006 - v1
Checksum:iAD102DCC4045DE13
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89095.1.
RefSeqiWP_011423657.1. NC_007761.1.
YP_467822.1. NC_007761.1.

Genome annotation databases

EnsemblBacteriaiABC89095; ABC89095; RHE_CH00272.
GeneIDi3890990.
KEGGiret:RHE_CH00272.
PATRICi23081834. VBIRhiEtl108884_0601.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89095.1 .
RefSeqi WP_011423657.1. NC_007761.1.
YP_467822.1. NC_007761.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4HAD X-ray 2.00 A/B/C/D 1-328 [» ]
ProteinModelPortali Q2KDJ1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 347834.RHE_CH00272.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC89095 ; ABC89095 ; RHE_CH00272 .
GeneIDi 3890990.
KEGGi ret:RHE_CH00272.
PATRICi 23081834. VBIRhiEtl108884_0601.

Phylogenomic databases

eggNOGi COG0673.
OMAi TAKIGRD.
OrthoDBi EOG65F90G.

Enzyme and pathway databases

BioCyci RETL347834:GJJ0-274-MONOMER.

Family and domain databases

Gene3Di 3.40.50.720. 1 hit.
InterProi IPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view ]
Pfami PF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251.
  2. "Crystal structure of probable oxidoreductase protein from Rhizobium etli CFN 42."
    Malashkevich V.N., Bhosle R., Toro R., Hillerich B., Gizzi A., Garforth S., Kar A., Chan M.K., Lafluer J., Patel H., Matikainen B., Chamala S., Lim S., Celikgil A., Villegas G., Evans B., Zenchek W., Love J.
    , Fiser A., Khafizov K., Seidel R., Bonanno J.B., Almo S.C.
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) IN COMPLEX WITH SODIUM.

Entry informationi

Entry nameiQ2KDJ1_RHIEC
AccessioniPrimary (citable) accession number: Q2KDJ1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

Similar proteinsi