Q2KD77 (Q2KD77_RHIEC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase HAMAP MF_00277
Short name=PII uridylyl-transferase HAMAP MF_00277
EC=2.7.7.59 HAMAP MF_00277

Alternative name(s):
UTase HAMAP MF_00277
Uridylyl-removing enzyme HAMAP MF_00277

Gene names

Name:	glnD HAMAP MF_00277 EMBL ABC89209.1
Ordered Locus Names:	RHE_CH00387

Organism

Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP]

Taxonomic identifier

347834 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	944 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein By similarity. HAMAP MF_00277 SAAS SAAS002912
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP MF_00277 SAAS SAAS002912
Sequence similarities	Belongs to the glnD family. HAMAP MF_00277

Ontologies

Keywords
Biological process	Nitrogen fixation HAMAP MF_00277
Molecular function	Nucleotidyltransferase HAMAP MF_00277 SAAS SAAS002912 EMBL ABC89209.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2KD77 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 21D549FB07BD282A	FASTA	944	106,093
	10 20 30 40 50 60 MRDLDFSTIL DTELLQKQCD AVAEANRNRP DIMRADLLAV LKKASTEGRQ KARAALAADG 70 80 90 100 110 120 SGLNCAYRIS WLQDQIITVL YNFATAHIFP LQKEKFAVTA VGGYGRDTLA PGSDIDLLFL 130 140 150 160 170 180 FPPRPAEETH KAVEFMLYVL WDMGFKVGHA TRTVEECIAL SKSDMTIRTA ILEMRYICGL 190 200 210 220 230 240 QRLETELEAR FDKEIVTGTG PEFIAAKLAE RDERHRKAGD TRYLVEPNVK EGKGGLRDLH 250 260 270 280 290 300 TLFWISKYYY HVRDQAELIK LGVLSKHEYR LLQKADDFLW AVRCHMHFLT GKAEERLSFD 310 320 330 340 350 360 IQREIAEAFG YHTRPGLSAV ERFMKHYFLV AKDVGDLTRI LCAALEDQQA KSIPGLTGVI 370 380 390 400 410 420 SRFTHRTRKI AGSVEFVEDR GRIALADAEV FKRDPVSILR LFHVADINGL EFHPDALKRV 430 440 450 460 470 480 TRSLALIDNR LRENDEANRL FMSILTSKRD PALILRRMNE AGVLGRFIPD FGKIVAMMQF 490 500 510 520 530 540 NMYHHYTVDE HLIRTVEVLS EIDKSRSEDL HPLANKLISG IEDREALYLA VLLHDIAKGR 550 560 570 580 590 600 QEDHSIAGAR VARKLCARFG LSQKQTELVV WLIEEHLTMS MVAQTRDLTD RKTIIDFADR 610 620 630 640 650 660 VQSLDRLKML LILTICDIRA VGPGVWNGWK GQLLRTLYYE TELLLAGGFS EVSRKERANA 670 680 690 700 710 720 AAEALRGALS DWSQKDRNTY TKLHYQPYLL SVPLEDQLRH ADFIRQADKA GQALATMVRT 730 740 750 760 770 780 DSFHAITEIT VLSPDHPRLL AVIAGACAAA GANIVDAQIF TTSDGRALDT IHVSREFADD 790 800 810 820 830 840 ADELRRAGTI GRMIENVLAG RKRLPEVIAT RTRNRKKSKA FDIPPSVNIT NSLSNKFTVI 850 860 870 880 890 900 EVECLDRPGL LSEITAVLSD LSLDIQSARI TTFGEKVIDT FYVTDLVGQK ISGDSKRANI 910 920 930 940 TARMKAVMAE EQDELRERMP SGIIAPAATA RTSPAAEKKA DSPA

References

[1]

"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000133 Genomic DNA. Translation: ABC89209.1.
RefSeq	YP_467936.1. NC_007761.1.
3D structure databases
ProteinModelPortal	Q2KD77.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2KD77.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3892105.
GenomeReviews	Gene locus RHE_CH00387 in contig CP000133_GR.
KEGG	ret:RHE_CH00387.
PATRIC	23082072. VBIRhiEtl108884_0720.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HBG687872.
OMA	MQHDLFH.
PhylomeDB	Q2KD77.
ProtClustDB	PRK05092.
Family and domain databases
HAMAP	MF_00277. PII_uridylyl_transf. [Tree]
InterPro	IPR002912. ACT-bd. IPR010043. GlnD_Uridyltrans. IPR023279. HD. IPR003607. Metal-dep_PHydrolase_HD_dom. IPR006674. Metal-dep_PHydrolase_HD_sub. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
Gene3D	G3DSA:1.10.3210.10. HD. 1 hit.
KO	K00990.
PANTHER	PTHR13734:SF1. GlnD_Uridyltrans. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2KD77_RHIEC

Accession

Primary (citable) accession number: Q2KD77

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)