Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q2KCK3

- Q2KCK3_RHIEC

UniProt

Q2KCK3 - Q2KCK3_RHIEC

Protein
Submitted name:

Putative DNA ligase protein

Gene

RHE_CH00617

Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRETL347834:GJJ0-623-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase proteinImported
    Gene namesi
    Ordered Locus Names:RHE_CH00617Imported
    OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
    Taxonomic identifieri347834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000001936: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi347834.RHE_CH00617.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2KCK3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    KOiK01971.
    OMAiVAFTEWT.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2KCK3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALETCQAKR NFKLAPKSKD GKAVAAKRPA AKARSPAPRE RDWPKGARKG    50
    AMPDFIEPAL AKLKPKPPAG DRWIHEIKFD GYRLQVRVEN GKIRMLTRSG 100
    LDWTEKFGRE VLEAFAALPV QSAAIDGEIV VERDTGASNF SALQHDLSEG 150
    RNDRFVFYAF DLLHFDGYNL VDVALIDRKQ LLESLLPDDN DKLRYSAHFN 200
    ESGGLVLDHA CRLSLEGMIS KLRDSKYRSG RKGDWIKSKC SHRQEFVIGG 250
    YVPSTSMKNA IGSLAVGYYQ GGELKYVGRV GTGYTAATAQ MLYEKLSRLT 300
    QNENSFDDKL TSEERRGLIY VKPQLVGEVE FRAWSADGNL RHAAFRGLRE 350
    DKPAKDVTRE MEKTTAPLLP KSAVTLTHPD RIYWPDEGVT KEGLANYYAQ 400
    VWRFMAPYVV NRPLALLRLP DGINGRQRFF QKHAWKGMNP HIEEITDPKD 450
    KQGEKLLRIT DFDGIVALVQ SAVLEIHPWG ASTDNWEKPD MITMDLDPDD 500
    EVAWADVIAA AYELKERLEA EGLAAFVKTS GGKGLHVVTP LTPKAGWAEV 550
    KGFAKWLADS MSADRPDRYL ATATKAKRTG RIFIDYLRNG RGNTAVAPYS 600
    ARARPGAAVS MPLEWSELTI EVGPAYFTVD NAPTRLDALP RDPWDGFFAA 650
    AKPLEKKKR 659
    Length:659
    Mass (Da):73,726
    Last modified:March 7, 2006 - v1
    Checksum:iF83279998556C209
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000133 Genomic DNA. Translation: ABC89433.1.
    RefSeqiWP_011423982.1. NC_007761.1.
    YP_468160.1. NC_007761.1.

    Genome annotation databases

    EnsemblBacteriaiABC89433; ABC89433; RHE_CH00617.
    GeneIDi3892739.
    KEGGiret:RHE_CH00617.
    PATRICi23082546. VBIRhiEtl108884_0952.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000133 Genomic DNA. Translation: ABC89433.1 .
    RefSeqi WP_011423982.1. NC_007761.1.
    YP_468160.1. NC_007761.1.

    3D structure databases

    ProteinModelPortali Q2KCK3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 347834.RHE_CH00617.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC89433 ; ABC89433 ; RHE_CH00617 .
    GeneIDi 3892739.
    KEGGi ret:RHE_CH00617.
    PATRICi 23082546. VBIRhiEtl108884_0952.

    Phylogenomic databases

    eggNOGi COG3285.
    KOi K01971.
    OMAi VAFTEWT.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci RETL347834:GJJ0-623-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CFN 42 / ATCC 51251Imported.

    Entry informationi

    Entry nameiQ2KCK3_RHIEC
    AccessioniPrimary (citable) accession number: Q2KCK3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 7, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3