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Q2KCK3

- Q2KCK3_RHIEC

UniProt

Q2KCK3 - Q2KCK3_RHIEC

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Protein
Submitted name: Putative DNA ligase protein
Gene
RHE_CH00617
Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-623-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase proteinImported
Gene namesi
Ordered Locus Names:RHE_CH00617Imported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000001936: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_CH00617.

Structurei

3D structure databases

ProteinModelPortaliQ2KCK3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
KOiK01971.
OMAiVAFTEWT.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2KCK3-1 [UniParc]FASTAAdd to Basket

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MALETCQAKR NFKLAPKSKD GKAVAAKRPA AKARSPAPRE RDWPKGARKG    50
AMPDFIEPAL AKLKPKPPAG DRWIHEIKFD GYRLQVRVEN GKIRMLTRSG 100
LDWTEKFGRE VLEAFAALPV QSAAIDGEIV VERDTGASNF SALQHDLSEG 150
RNDRFVFYAF DLLHFDGYNL VDVALIDRKQ LLESLLPDDN DKLRYSAHFN 200
ESGGLVLDHA CRLSLEGMIS KLRDSKYRSG RKGDWIKSKC SHRQEFVIGG 250
YVPSTSMKNA IGSLAVGYYQ GGELKYVGRV GTGYTAATAQ MLYEKLSRLT 300
QNENSFDDKL TSEERRGLIY VKPQLVGEVE FRAWSADGNL RHAAFRGLRE 350
DKPAKDVTRE MEKTTAPLLP KSAVTLTHPD RIYWPDEGVT KEGLANYYAQ 400
VWRFMAPYVV NRPLALLRLP DGINGRQRFF QKHAWKGMNP HIEEITDPKD 450
KQGEKLLRIT DFDGIVALVQ SAVLEIHPWG ASTDNWEKPD MITMDLDPDD 500
EVAWADVIAA AYELKERLEA EGLAAFVKTS GGKGLHVVTP LTPKAGWAEV 550
KGFAKWLADS MSADRPDRYL ATATKAKRTG RIFIDYLRNG RGNTAVAPYS 600
ARARPGAAVS MPLEWSELTI EVGPAYFTVD NAPTRLDALP RDPWDGFFAA 650
AKPLEKKKR 659
Length:659
Mass (Da):73,726
Last modified:March 7, 2006 - v1
Checksum:iF83279998556C209
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89433.1.
RefSeqiWP_011423982.1. NC_007761.1.
YP_468160.1. NC_007761.1.

Genome annotation databases

EnsemblBacteriaiABC89433; ABC89433; RHE_CH00617.
GeneIDi3892739.
KEGGiret:RHE_CH00617.
PATRICi23082546. VBIRhiEtl108884_0952.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89433.1 .
RefSeqi WP_011423982.1. NC_007761.1.
YP_468160.1. NC_007761.1.

3D structure databases

ProteinModelPortali Q2KCK3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 347834.RHE_CH00617.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC89433 ; ABC89433 ; RHE_CH00617 .
GeneIDi 3892739.
KEGGi ret:RHE_CH00617.
PATRICi 23082546. VBIRhiEtl108884_0952.

Phylogenomic databases

eggNOGi COG3285.
KOi K01971.
OMAi VAFTEWT.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RETL347834:GJJ0-623-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251.

Entry informationi

Entry nameiQ2KCK3_RHIEC
AccessioniPrimary (citable) accession number: Q2KCK3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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