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Q2KB17

- Q2KB17_RHIEC

UniProt

Q2KB17 - Q2KB17_RHIEC

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Protein
Submitted name: Probable DNA ligase (ATP) protein
Gene
RHE_CH01164
Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-1173-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable DNA ligase (ATP) proteinImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RHE_CH01164Imported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000001936: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_CH01164.

Structurei

3D structure databases

ProteinModelPortaliQ2KB17.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2KB17-1 [UniParc]FASTAAdd to Basket

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MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR    50
NVKPAMLREL VLERMDEVLF HYSYDYVGDL AETISLVWDN ERDIDRSALA 100
QPRLGEVVTR MNGLGRTEVR GYVRDLLDRL DSSGRFAFIK LATGALRIGV 150
SARLAKQALA DLGGKDVAEI ETLWHGLQPP YETLFQWLAG GGDKPALASP 200
AIFHSVMLAN AVEEGDLTGL DPADYAAEWK WDGIRVQLSR SGDRRKIYSR 250
SGDDISGAFP DILEAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR 300
KTVTAKMLDD YPAFIRAYDM LFDGEEDIRG RNYVDRRERL SDIIDRAPHD 350
RFDLSPLVPF SSWEELDALR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF 400
KWKRNPYNVD AVLMYAQRGH GKRSSYYSDF TFGVWADDED GEQLVPVGKA 450
YFGFTDAELE LLDKFVRNNT TERFGPVRAV RADRDFGFVV EVAFEGINRS 500
TRHKSGVAMR FPRIARLRPD KPPYEADRLR TLIAMIDAKP G 541
Length:541
Mass (Da):60,974
Last modified:March 7, 2006 - v1
Checksum:i363C43532BA8534F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89969.1.
RefSeqiWP_011424503.1. NC_007761.1.
YP_468696.1. NC_007761.1.

Genome annotation databases

EnsemblBacteriaiABC89969; ABC89969; RHE_CH01164.
GeneIDi3890788.
KEGGiret:RHE_CH01164.
PATRICi23083689. VBIRhiEtl108884_1518.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000133 Genomic DNA. Translation: ABC89969.1 .
RefSeqi WP_011424503.1. NC_007761.1.
YP_468696.1. NC_007761.1.

3D structure databases

ProteinModelPortali Q2KB17.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 347834.RHE_CH01164.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC89969 ; ABC89969 ; RHE_CH01164 .
GeneIDi 3890788.
KEGGi ret:RHE_CH01164.
PATRICi 23083689. VBIRhiEtl108884_1518.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci RETL347834:GJJ0-1173-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251.

Entry informationi

Entry nameiQ2KB17_RHIEC
AccessioniPrimary (citable) accession number: Q2KB17
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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