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Q2KB17 (Q2KB17_RHIEC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABC89969.1
Gene names
Ordered Locus Names:RHE_CH01164 EMBL ABC89969.1
OrganismRhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP] EMBL ABC89969.1
Taxonomic identifier347834 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q2KB17 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 363C43532BA8534F

FASTA54160,974
        10         20         30         40         50         60 
MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR NVKPAMLREL 

        70         80         90        100        110        120 
VLERMDEVLF HYSYDYVGDL AETISLVWDN ERDIDRSALA QPRLGEVVTR MNGLGRTEVR 

       130        140        150        160        170        180 
GYVRDLLDRL DSSGRFAFIK LATGALRIGV SARLAKQALA DLGGKDVAEI ETLWHGLQPP 

       190        200        210        220        230        240 
YETLFQWLAG GGDKPALASP AIFHSVMLAN AVEEGDLTGL DPADYAAEWK WDGIRVQLSR 

       250        260        270        280        290        300 
SGDRRKIYSR SGDDISGAFP DILEAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR 

       310        320        330        340        350        360 
KTVTAKMLDD YPAFIRAYDM LFDGEEDIRG RNYVDRRERL SDIIDRAPHD RFDLSPLVPF 

       370        380        390        400        410        420 
SSWEELDALR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF KWKRNPYNVD AVLMYAQRGH 

       430        440        450        460        470        480 
GKRSSYYSDF TFGVWADDED GEQLVPVGKA YFGFTDAELE LLDKFVRNNT TERFGPVRAV 

       490        500        510        520        530        540 
RADRDFGFVV EVAFEGINRS TRHKSGVAMR FPRIARLRPD KPPYEADRLR TLIAMIDAKP 


G 

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References

[1]"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons."
Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G.
Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CFN 42 / ATCC 51251.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000133 Genomic DNA. Translation: ABC89969.1.
RefSeqYP_468696.1. NC_007761.1.

3D structure databases

ProteinModelPortalQ2KB17.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING347834.RHE_CH01164.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC89969; ABC89969; RHE_CH01164.
GeneID3890788.
KEGGret:RHE_CH01164.
PATRIC23083689. VBIRhiEtl108884_1518.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycRETL347834:GJJ0-1173-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2KB17_RHIEC
AccessionPrimary (citable) accession number: Q2KB17
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)