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Protein

30S ribosomal protein S21 1

Gene

rpsU1

Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-1180-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21 1UniRule annotation
Gene namesi
Name:rpsU1UniRule annotation
Ordered Locus Names:RHE_CH01171
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000001936 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 787830S ribosomal protein S21 1PRO_0000266744Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_CH01171.

Structurei

3D structure databases

ProteinModelPortaliQ2KB10.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OrthoDBiEOG6FBX3Z.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21.
InterProiIPR001911. Ribosomal_S21.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2KB10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVLVRDNNV DQALRVLKKK MQREGLFREM KARSAYEKPS EKRAREKGEA
60 70
VRRQRKLARK KLQREGLLPA PKKAVRAR
Length:78
Mass (Da):9,226
Last modified:March 7, 2006 - v1
Checksum:i0BD0772DB53AC890
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000133 Genomic DNA. Translation: ABC89976.1.
RefSeqiWP_011424510.1. NC_007761.1.

Genome annotation databases

EnsemblBacteriaiABC89976; ABC89976; RHE_CH01171.
GeneIDi24301621.
KEGGiret:RHE_CH01171.
PATRICi23083705. VBIRhiEtl108884_1526.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000133 Genomic DNA. Translation: ABC89976.1.
RefSeqiWP_011424510.1. NC_007761.1.

3D structure databases

ProteinModelPortaliQ2KB10.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi347834.RHE_CH01171.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC89976; ABC89976; RHE_CH01171.
GeneIDi24301621.
KEGGiret:RHE_CH01171.
PATRICi23083705. VBIRhiEtl108884_1526.

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OrthoDBiEOG6FBX3Z.

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-1180-MONOMER.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21.
InterProiIPR001911. Ribosomal_S21.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251.

Entry informationi

Entry nameiRS211_RHIEC
AccessioniPrimary (citable) accession number: Q2KB10
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: March 7, 2006
Last modified: July 6, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.