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Q2K8X0 (Q2K8X0_RHIEC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL ABC90716.1
Ordered Locus Names:RHE_CH01930
OrganismRhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP]
Taxonomic identifier347834 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length281 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
Q2K8X0 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: E4113BE00D59F9D9

FASTA28129,981
        10         20         30         40         50         60 
MSTDTNSEVK IGEGEGQVTF SNAGRLSLIA GPCQMESRDH AFMVAGTLKE LCAKLGVGLV 

        70         80         90        100        110        120 
YKSSFDKANR TSLSAERGIG LEKGMEVFAD LKKEFGFPVL TDVHTAEQCA EVAEVIDVLQ 

       130        140        150        160        170        180 
IPAFLCRQTD LLIAAARTGR VVNVKKGQFL APWDMKNVLK KLNASGNPNV LLCERGASFG 

       190        200        210        220        230        240 
YNTLVSDMRS LPIMTAMGAP VIFDATHSVA QPGGQGESSG GQREFVETLA RAAVATGIAG 

       250        260        270        280 
VFLETHQDPD NAPSDGPNMV YLKDMPRLLE KLLAFDAVAK A

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References

[1]"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons."
Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G.
Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000133 Genomic DNA. Translation: ABC90716.1.
RefSeqYP_469443.1. NC_007761.1.

3D structure databases

ProteinModelPortalQ2K8X0.
SMRQ2K8X0. Positions 25-279.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2K8X0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3893952.
GenomeReviewsGene locus RHE_CH01930 in contig CP000133_GR.
KEGGret:RHE_CH01930.
PATRIC23085344. VBIRhiEtl108884_2328.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAESRDHAF.
PhylomeDBQ2K8X0.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2K8X0_RHIEC
AccessionPrimary (citable) accession number: Q2K8X0
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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