Reviewed, UniProtKB/Swiss-Prot Q2K869 (TPIS1_RHIEC)

Names and origin

Protein names

Recommended name:
    Triosephosphate isomerase 1
      Short name=TIM 1
    EC=5.3.1.1
Alternative name(s):
    Triose-phosphate isomerase 1

Gene names

Name:	tpiA
Synonyms:	tpiAch
Ordered Locus Names:	RHE_CH02186

Organism

Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP]

Taxonomic identifier

347834 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147
Pathway	Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147
Subunit structure	Homodimer By similarity. HAMAP MF_00147
Subcellular location	Cytoplasm Probable HAMAP MF_00147.
Sequence similarities	Belongs to the triosephosphate isomerase family.

Ontologies

Keywords
Biological process	Gluconeogenesis Glycolysis Pentose shunt
Cellular component	Cytoplasm
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gluconeogenesis Inferred from electronic annotation. Source: HAMAP glycolysis Inferred from electronic annotation. Source: HAMAP pentose-phosphate shunt Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	triose-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 256	256	Triosephosphate isomerase 1 HAMAP MF_00147		PRO_0000236165
Sites
	Active site	99	1	Electrophile By similarity
	Active site	169	1	Proton acceptor By similarity
	Binding site	12	1	Substrate By similarity
	Binding site	14	1	Substrate By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q2K869-1 [UniParc]. Last modified May 16, 2006. Version 2. Checksum: 795C601B8262CCAE	FASTA	256	26,953
	10 20 30 40 50 60 MTPDVRPLVA GNWKMNGTRA SLDQIKAIAE GVRPPLADKV EALICPPTTL LYVATALCTD 70 80 90 100 110 120 SPLAIGAQDC HQKPSGAHTG DISAEMIADS FGTYVIVGHS ERRTDHAETD HLVRAKAEAA 130 140 150 160 170 180 FAAELTAIIC IGETADERRA GQELDVIKRQ LSASVPDAAT AENTVIAYEP IWAIGTGVTP 190 200 210 220 230 240 TSGDVEKAHA FMRAELVSRF GDEGRKMRLL YGGSVKPANA GELLGIANVD GALIGGASLK 250 AADFLAIYRA YEALLA

References

[1]

"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000133 Genomic DNA. Translation: ABC90967.1. Different initiation.
RefSeq	YP_469694.1.
3D structure databases
SMR	Q2K869. Positions 6-250.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2K869.
Genome annotation databases
GeneID	3892228.
GenomeReviews	Gene locus RHE_CH02186 in contig CP000133_GR.
KEGG	ret:RHE_CH02186.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG708281.
PhylomeDB	Q2K869.
Family and domain databases
HAMAP	MF_00147_B. TIM_B. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR000652. Triosephosphate_isomerase. IPR020861. Triosephosphate_isomerase_AS. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHER	PTHR21139. Triophos_ismrse. 1 hit.
Pfam	PF00121. TIM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00419. tim. 1 hit.
PROSITE	PS00171. TIM_1. 1 hit. PS51440. TIM_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TPIS1_RHIEC

Accession

Primary (citable) accession number: Q2K869

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	February 9, 2010
This is version 30 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)