Q2K812 (Q2K812_RHIEC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cell-wall lytic enzyme EMBL ABC91024.1

Gene names

Name:	lysM EMBL ABC91024.1
Ordered Locus Names:	RHE_CH02244

Organism

Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP]

Taxonomic identifier

347834 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	346 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2K812 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: A3F958F8B145FDF4	FASTA	346	38,519
	10 20 30 40 50 60 MRSSAVSAIL LAAVILSGCS TSSGAEDVLT PVPSKETTNA IAKPSGPIPA AAVGDAAPQA 70 80 90 100 110 120 SPPQEALSWT GPVPEPQALV PAERPVGMPM PTERPVAMLM PANPGIDPDP GPKSPTRSRI 130 140 150 160 170 180 YSHRFRDAKP INFGRTSPRK LAVHGVDVSR WQGEIDWETL RQQGANFVYI KATDGGDHLD 190 200 210 220 230 240 PMFRKNWRRA KEAGLKHGAY HFFYWCRTAG EQADWFIRNV PKEANALPPV IDVEWNGESS 250 260 270 280 290 300 CKRRISPARV REKMQVFMDK LERHYGQRPI IYTAPDFYRD NLKGQMLDYP FWLRSVAAHP 310 320 330 340 SKVYPGRKWL FWQYSGSGLS DGVDGKIDLN VFNGSESDWH DWVASR

References

[1]

"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000133 Genomic DNA. Translation: ABC91024.1.
RefSeq	YP_469751.1. NC_007761.1.
3D structure databases
ProteinModelPortal	Q2K812.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2K812.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3890671.
GenomeReviews	Gene locus RHE_CH02244 in contig CP000133_GR.
KEGG	ret:RHE_CH02244.
PATRIC	23086014. VBIRhiEtl108884_2660.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	NGESSCK.
PhylomeDB	Q2K812.
ProtClustDB	CLSK862917.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2K812_RHIEC

Accession

Primary (citable) accession number: Q2K812

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)