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Q2K0P3

- Q2K0P3_RHIEC

UniProt

Q2K0P3 - Q2K0P3_RHIEC

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Protein
Submitted name: Putative ATP-dependent DNA ligase protein
Gene
RHE_PE00252
Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-4969-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligase proteinImported
Gene namesi
Ordered Locus Names:RHE_PE00252Imported
Encoded oniPlasmid p42eImported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000001936: Plasmid p42e

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_PE00252.

Structurei

3D structure databases

ProteinModelPortaliQ2K0P3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2K0P3-1 [UniParc]FASTAAdd to Basket

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MASDKLSSYR SKRDFQKTAE PSGERSLKQS NRRRFVIQKH DATRLHYDLR    50
LELDGVFKSW AVTKGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPKGQYGG 100
GTVMLWDRGY WEPEGRKSPE QALSKGDFKF TLEGERLHGS FVLVRMRNDR 150
ERSKRTNWLL IKHHDEFSVD ENGASILEEN VTSVASGRSM EMIAAGKGRK 200
PKPFMVEGGK VQADAVWDSN HGLAAEERQS EASAGKRAGT ATAVDLPDFI 250
APQLCEKVER PPGGDGWIHE IKFDGYRIQM RVLDGEVTLK TRKGLDWTAK 300
YPEIAEAASG LPDCILDGEI CALDEQGAPN FAALQAALSE GKTASLVYFA 350
FDLLYDGGED LRSKPLIERK RRLQELLTEA GNDPRIRYVE HFETGGDAVL 400
RSACKLSLEG IISKQTDAPY QSGRTESWAK SKCRAGHEVV IGAYAKTNGR 450
FRSLLAGVFR GDHFVYVGRV GTGYGAKKVE TLLPKLKALE TARSPFTGIG 500
APKKQAEVVW VKPELVAEIE FEGWTADGLV RQAAFKGLRE DKPAREVEAE 550
PPVRPAKADI AEPVPRARQT PARRKGAKAD VMGVLISNPD KPLWPDANGS 600
EPVTKEELAG YYEAVGDWMI DHIKGRPCSI IRAPDGIGGE QFFQRHAMPG 650
QSNLLDLVKV FGDKKPYLQI DRIEGLAAVA QIAAVELHPW NCEPGQPEVP 700
GRLVFDLDPG PDVPFATVVA AAREMRDRLE DLGLISFCKT TGGKGLHVVT 750
PLAVNKRKPL SWPEAKAFAH DVCQQMARNN PDLYLIKMTK SLRGGRIFLD 800
YLRNDRMATA VAPLSPRARP GATVSMPLTW TQVKSDLDPK RFTIRTVPAL 850
LSKSSAWKDY CEGQRPLEQA IKKLGRAGKH AA 882
Length:882
Mass (Da):97,521
Last modified:March 7, 2006 - v1
Checksum:i8C9E45DB21C6FFE6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000137 Genomic DNA. Translation: ABC93687.1.
RefSeqiWP_011428106.1. NC_007765.1.
YP_472414.1. NC_007765.1.

Genome annotation databases

EnsemblBacteriaiABC93687; ABC93687; RHE_PE00252.
GeneIDi3895678.
KEGGiret:RHE_PE00252.
PATRICi23091770. VBIRhiEtl108884_5514.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000137 Genomic DNA. Translation: ABC93687.1 .
RefSeqi WP_011428106.1. NC_007765.1.
YP_472414.1. NC_007765.1.

3D structure databases

ProteinModelPortali Q2K0P3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 347834.RHE_PE00252.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC93687 ; ABC93687 ; RHE_PE00252 .
GeneIDi 3895678.
KEGGi ret:RHE_PE00252.
PATRICi 23091770. VBIRhiEtl108884_5514.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RETL347834:GJJ0-4969-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251.

Entry informationi

Entry nameiQ2K0P3_RHIEC
AccessioniPrimary (citable) accession number: Q2K0P3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

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