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Q2K0P1

- Q2K0P1_RHIEC

UniProt

Q2K0P1 - Q2K0P1_RHIEC

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Protein
Submitted name:

Putative DNA ligase (ATP) protein

Gene

RHE_PE00251

Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-4968-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase (ATP) proteinImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RHE_PE00251Imported
Encoded oniPlasmid p42eImported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000001936: Plasmid p42e

Interactioni

Protein-protein interaction databases

STRINGi347834.RHE_PE00251.

Structurei

3D structure databases

ProteinModelPortaliQ2K0P1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiLEHACHH.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2K0P1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTRSRRPSAP LLRDSSSSIQ SRPVRRRDPD QPNLPFDAMP SRVEPCLALL
60 70 80 90 100
KQTVPQGPDW LYEVKWDGYR LALHIEPKGI RILTRGGHDW TRRFPTIAAR
110 120 130 140 150
ARELGVSSCI LDGEAVVLDE EGRSDFGALQ RSLGGRGGKR ISTESIFYAF
160 170 180 190 200
DLLYLDGHDL TRTELSVRRH LLEDLIPAAD GGAIRFSQEL DLGGEELLEH
210 220 230 240 250
ACRLGMEGII AKRTDSPYRS GRLGDWQKIK CVQSESFMIV GYEESASTRG
260 270 280 290 300
GLGSLLLAGR KGHDWIYVGS VGTGFNRTEA EYLRKTLNRL QTKKPIVPLK
310 320 330 340 350
GKRLVFSQPT LIAEIEFRGW TREGSLRHPS YKGLREIQDN AAVFDMADGP

AAIR
Length:354
Mass (Da):39,597
Last modified:March 7, 2006 - v1
Checksum:iA73477B36C00886F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000137 Genomic DNA. Translation: ABC93686.1.
RefSeqiWP_011428105.1. NC_007765.1.
YP_472413.1. NC_007765.1.

Genome annotation databases

EnsemblBacteriaiABC93686; ABC93686; RHE_PE00251.
GeneIDi3895677.
KEGGiret:RHE_PE00251.
PATRICi23091768. VBIRhiEtl108884_5513.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000137 Genomic DNA. Translation: ABC93686.1 .
RefSeqi WP_011428105.1. NC_007765.1.
YP_472413.1. NC_007765.1.

3D structure databases

ProteinModelPortali Q2K0P1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 347834.RHE_PE00251.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC93686 ; ABC93686 ; RHE_PE00251 .
GeneIDi 3895677.
KEGGi ret:RHE_PE00251.
PATRICi 23091768. VBIRhiEtl108884_5513.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi LEHACHH.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RETL347834:GJJ0-4968-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFN 42 / ATCC 51251Imported.

Entry informationi

Entry nameiQ2K0P1_RHIEC
AccessioniPrimary (citable) accession number: Q2K0P1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: October 1, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3