Reviewed,
UniProtKB/Swiss-Prot Q2JZQ2 (TPIS2_RHIEC)
Last modified
February 9, 2010.
Version 30.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Triosephosphate isomerase 2 Short name=TIM 2 EC=5.3.1.1 Alternative name(s): Triose-phosphate isomerase 2 | ||||||
| Gene names |
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| Encoded on | Plasmid p42f | ||||||
| Organism | Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 347834 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium |
Protein attributes
| Sequence length | 267 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147 |
| Pathway | Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147 |
| Subunit structure | Homodimer By similarity. HAMAP MF_00147 |
| Subcellular location | Cytoplasm Probable HAMAP MF_00147. |
| Sequence similarities | Belongs to the triosephosphate isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Gluconeogenesis Glycolysis Pentose shunt |
| Cellular component | Cytoplasm |
| Molecular function | Isomerase |
| Technical term | Complete proteome Plasmid |
| Gene Ontology (GO) | |
| Biological process | gluconeogenesis Inferred from electronic annotation. Source: HAMAP glycolysisInferred from electronic annotation. Source: HAMAP pentose-phosphate shuntInferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | triose-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 267 | 267 | Triosephosphate isomerase 2 HAMAP MF_00147 | PRO_0000236166 | |||||
Sites | |||||||||
| Active site | 95 | 1 | Electrophile By similarity | ||||||
| Active site | 168 | 1 | Proton acceptor By similarity | ||||||
| Binding site | 10 | 1 | Substrate By similarity | ||||||
Sequences
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References
| [1] | "The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000138 Genomic DNA. Translation: ABC93934.1. |
| RefSeq | YP_472661.1. |
3D structure databases | |
| SMR | Q2JZQ2. Positions 3-246. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q2JZQ2. |
Genome annotation databases | |
| GeneID | 3896224. |
| GenomeReviews | Gene locus RHE_PF00040 in contig CP000138_GR. |
| KEGG | ret:RHE_PF00040. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0149. |
| HOGENOM | HBG708281. |
| OMA | EHFGETD. |
Family and domain databases | |
| HAMAP | MF_00147_B. TIM_B. [Tree] |
| InterPro | IPR013785. Aldolase_TIM. IPR000652. Triosephosphate_isomerase. IPR020861. Triosephosphate_isomerase_AS. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| PANTHER | PTHR21139. Triophos_ismrse. 1 hit. |
| Pfam | PF00121. TIM. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00419. tim. 1 hit. |
| PROSITE | PS00171. TIM_1. 1 hit. PS51440. TIM_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | TPIS2_RHIEC | ||||||||
| Accession | Primary (citable) accession number: Q2JZQ2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


