Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable methyl-accepting chemotaxis protein

Gene

RHE_PF00178

Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-4273-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:RHE_PF00178Imported
Encoded oniPlasmid p42fImported
OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)Imported
Taxonomic identifieri347834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000001936 Componenti: Plasmid p42f

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei57 – 82HelicalSequence analysisAdd BLAST26

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ2JZB7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini84 – 137HAMPInterPro annotationAdd BLAST54
Domaini222 – 451Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK03406.
OMAiKAHGAIE.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JZB7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNREIIPALN AKDESKAHGA IEQLRVAFHA HQDAVEKLVA NSDAFLKGEE
60 70 80 90 100
SNAASEIITW TIYAGAAGFG SFALLLVGLY FLRRRAIVPL DGMKAYMGNL
110 120 130 140 150
AEGDFSTEVP YANRSDEIGA MSKAVAVFRR NALERQDAQK RETALRDQEF
160 170 180 190 200
QRERSQMAEK AAEEQRREAV IEALTYGLDQ LSLGNLDCRI TTAFAPAYET
210 220 230 240 250
LRAKFNNSMN ALGASMAEIS RTSRQVGSSS AGITEAADSL ASRTEQQAAM
260 270 280 290 300
LEEATAALGE MNAKTKDASD HAGKATGMMA ETRSSAEHSA AVVREAIDAM
310 320 330 340 350
QRIEGSSAQI GEIVNVIDEI AFQTNLLALN AGVEAARAGE AGKGFAVVAQ
360 370 380 390 400
EVRELALRSA NAAKEIRSLI STSSSEVSTG VELVNRTGKA LMEIEGQVEQ
410 420 430 440 450
VAGLIARIVS VSSEQAVAIG EINASVNALD EVTQRNAAMA AETVSACRAL
460 470
GGQTQTLEGV VSRFQIDAAA AGSRSPKAA
Length:479
Mass (Da):50,763
Last modified:March 7, 2006 - v1
Checksum:iBB3DE9467FD964BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000138 Genomic DNA. Translation: ABC94069.1.

Genome annotation databases

EnsemblBacteriaiABC94069; ABC94069; RHE_PF00178.
KEGGiret:RHE_PF00178.
PATRICi23092593. VBIRhiEtl108884_5925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000138 Genomic DNA. Translation: ABC94069.1.

3D structure databases

ProteinModelPortaliQ2JZB7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC94069; ABC94069; RHE_PF00178.
KEGGiret:RHE_PF00178.
PATRICi23092593. VBIRhiEtl108884_5925.

Phylogenomic databases

KOiK03406.
OMAiKAHGAIE.

Enzyme and pathway databases

BioCyciRETL347834:GJJ0-4273-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ2JZB7_RHIEC
AccessioniPrimary (citable) accession number: Q2JZB7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: November 2, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.