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Q2JZ21

- GLGB2_RHIEC

UniProt

Q2JZ21 - GLGB2_RHIEC

Protein

1,4-alpha-glucan branching enzyme GlgB 2

Gene

glgB2

Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei413 – 4131NucleophileUniRule annotation
    Active sitei466 – 4661Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciRETL347834:GJJ0-4419-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgB 2UniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2UniRule annotation
    Alpha-(1->4)-glucan branching enzyme 2UniRule annotation
    Glycogen branching enzyme 2UniRule annotation
    Short name:
    BE 2UniRule annotation
    Gene namesi
    Name:glgB2UniRule annotation
    Ordered Locus Names:RHE_PF00275
    Encoded oniPlasmid p42f0 Publication
    OrganismiRhizobium etli (strain CFN 42 / ATCC 51251)
    Taxonomic identifieri347834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000001936: Plasmid p42f

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7327321,4-alpha-glucan branching enzyme GlgB 2PRO_0000260683Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi347834.RHE_PF00275.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2JZ21.
    SMRiQ2JZ21. Positions 121-731.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiHERCPHA.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2JZ21-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNVERSEFLA GVGHDALWAL IEGRHGDPFS ILGPHESGGM TIVRVYLPGA    50
    EGVDLIEAAS GRVVTPFSIA HPSGLFAAAM GSRMHYRLRI TWPDGEQITE 100
    DPYSFGLLLG ELDLHLISEG THYSLSRTLG AVEMAIDDVA GVRFAVWAPN 150
    ARRVSVVGDF NAWDGRRNPM RLRQSAGVWE LFMPRLAPGE RYKFEIIDPH 200
    GNCLPQKADP VARASEAAPS TASIVASSTR FRWTDDNWMK GQSRQQRLEG 250
    PISVYEVHAG SWLRENGGRS LDWVELSQRL VPYVREMGFT HIELLPIMEH 300
    PFGGSWGYQP LGLFAPTGRY GTPEDLAYFI DRCHGAGIGV ILDWVPAHFP 350
    TDVWGLARFD GTALYEHEDP REGFHRDWNT LIYNLGRNEV KGFLIASALE 400
    WLERYHIDGL RVDAVASMLY RDYSRNEGEW IPNRYGGREN LEAVEFFKHL 450
    NSIVHERCPH AMMIAEESTA WPGVTKPPEE GGLGFDMKWN MGWMHDSLSY 500
    IEKDPVYRSY HHGTMTFGMI YAYSERFILP ISHDEVVYGK GSLLGKMPGD 550
    EWQKFANLRS YLAFMWGHPG KKLIFMGGEI AQPSEWNHDA SIAWDVLDQP 600
    AHAGLQRLVK DLNGFYKDEA ALQFGDFHSE GFDWAAADDA VNSVLGMLRY 650
    APDRSSSVLV VSNFTPVPRY GYRIGVPQDG VWIEKVTTDA REYGGSGLVN 700
    GAVSSESVPA HGRPHSLWLT LPPLATVLLK SP 732
    Length:732
    Mass (Da):81,931
    Last modified:March 7, 2006 - v1
    Checksum:i23B9D25D7E41BA0E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000138 Genomic DNA. Translation: ABC94165.1.
    RefSeqiYP_472892.1. NC_007766.1.

    Genome annotation databases

    EnsemblBacteriaiABC94165; ABC94165; RHE_PF00275.
    GeneIDi3895849.
    KEGGiret:RHE_PF00275.
    PATRICi23092805. VBIRhiEtl108884_6031.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000138 Genomic DNA. Translation: ABC94165.1 .
    RefSeqi YP_472892.1. NC_007766.1.

    3D structure databases

    ProteinModelPortali Q2JZ21.
    SMRi Q2JZ21. Positions 121-731.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 347834.RHE_PF00275.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC94165 ; ABC94165 ; RHE_PF00275 .
    GeneIDi 3895849.
    KEGGi ret:RHE_PF00275.
    PATRICi 23092805. VBIRhiEtl108884_6031.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi HERCPHA.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci RETL347834:GJJ0-4419-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CFN 42 / ATCC 51251.

    Entry informationi

    Entry nameiGLGB2_RHIEC
    AccessioniPrimary (citable) accession number: Q2JZ21
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3