Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q2JY38 (Q2JY38_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
WD domain, G-beta repeat protein EMBL ABC98274.1
Gene names
Ordered Locus Names:CYA_0042
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP] EMBL ABC98274.1
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length702 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainRepeat RuleBase RU003532
WD repeat RuleBase RU000362
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

protein kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JY38 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 92B3D714D3ABC994

FASTA70274,603
        10         20         30         40         50         60 
MVGQTLAGRY QILEELGSSG QTYLAQDGHC PEQSWVVIRR WQPRSPKGEE PSAARQRFQQ 

        70         80         90        100        110        120 
AMALRERLGS HDAIPRLLAY FEEEGGFYWV EEWIQGQTLE QALRQTTEQG QLWSEVEVRA 

       130        140        150        160        170        180 
FLQDVLQTLA FLQGEGVSHG NLRPSCLLCR QSDGRWMVLG LGQAMASAGS GLEASSAGGD 

       190        200        210        220        230        240 
LDALGLLALQ ALSGIPTHKL FRDPLTGELR WHDLAPTSAP FAAFLDGLVG CDPRQRFASA 

       250        260        270        280        290        300 
AAALAALQAL SLAEGVSPGA EILPDPVAVD PWQEPTTPPR SPVSLRARFW IPPLWAGSSL 

       310        320        330        340        350        360 
AALLVLFGVA AWQLAANLSR WGEKAVVPRD SVPPAGTMAN LGSAGPNSFS FTEQPPNPSK 

       370        380        390        400        410        420 
TGSPALDLAD WAKSLRLKAK LEGPAAITAL AISPDGNLLV AGGDDGVIRF WDPQAGQLLQ 

       430        440        450        460        470        480 
SWTGHEGSIE TLAISPDGTF LVSGGADKTV RVWDLAALGD PALRSGEGVP RLQLQGHTDL 

       490        500        510        520        530        540 
INSVAISPDG RWIASGSADR TIRLWQAEDG QLVRTIDSAA YPVTQGAGIT AVAFAPSGLA 

       550        560        570        580        590        600 
EEGSSPWILV AANGNPAVYL WDPRSGALLK TLEADYPIEQ VLLSPDGRHL LAASASGIWI 

       610        620        630        640        650        660 
WNVGTGSRER TLPQPLSGLA TLALSPDGRL LASSTDHRAQ QIKLWDLRSG KELRTLGGQT 

       670        680        690        700 
WMVSALLFGP DGQTLLSGGA DGAIRIWGPE HPASEAEKGT QP

« Hide

References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000239 Genomic DNA. Translation: ABC98274.1.
RefSeqYP_473537.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JY38.
ModBaseSearch...

Protein-protein interaction databases

STRING321327.CYA_0042.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC98274; ABC98274; CYA_0042.
GeneID3897671.
KEGGcya:CYA_0042.
PATRIC23808347. VBISynSp90045_0042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2319.
HOGENOMHOG000127899.
OMAIEIWDLK.
ProtClustDBCLSK750045.

Family and domain databases

Gene3D2.130.10.10. 2 hits.
InterProIPR020472. G-protein_beta_WD-40_rep.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_cat_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00069. Pkinase. 1 hit.
PF00400. WD40. 4 hits.
[Graphical view]
PRINTSPR00320. GPROTEINBRPT.
SMARTSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF56112. Kinase_like. 1 hit.
SSF50978. WD40_like. 1 hit.
PROSITEPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JY38_SYNJA
AccessionPrimary (citable) accession number: Q2JY38
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info