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Protein
Submitted name:

WD domain, G-beta repeat protein

Gene

CYA_0042

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. protein kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321327:GHFX-42-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
WD domain, G-beta repeat proteinImported
Gene namesi
Ordered Locus Names:CYA_0042Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_0042.

Structurei

3D structure databases

ProteinModelPortaliQ2JY38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

eggNOGiCOG2319.
HOGENOMiHOG000127899.
OMAiIEIWDLK.
OrthoDBiEOG66F036.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00069. Pkinase. 1 hit.
PF00400. WD40. 4 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JY38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGQTLAGRY QILEELGSSG QTYLAQDGHC PEQSWVVIRR WQPRSPKGEE
60 70 80 90 100
PSAARQRFQQ AMALRERLGS HDAIPRLLAY FEEEGGFYWV EEWIQGQTLE
110 120 130 140 150
QALRQTTEQG QLWSEVEVRA FLQDVLQTLA FLQGEGVSHG NLRPSCLLCR
160 170 180 190 200
QSDGRWMVLG LGQAMASAGS GLEASSAGGD LDALGLLALQ ALSGIPTHKL
210 220 230 240 250
FRDPLTGELR WHDLAPTSAP FAAFLDGLVG CDPRQRFASA AAALAALQAL
260 270 280 290 300
SLAEGVSPGA EILPDPVAVD PWQEPTTPPR SPVSLRARFW IPPLWAGSSL
310 320 330 340 350
AALLVLFGVA AWQLAANLSR WGEKAVVPRD SVPPAGTMAN LGSAGPNSFS
360 370 380 390 400
FTEQPPNPSK TGSPALDLAD WAKSLRLKAK LEGPAAITAL AISPDGNLLV
410 420 430 440 450
AGGDDGVIRF WDPQAGQLLQ SWTGHEGSIE TLAISPDGTF LVSGGADKTV
460 470 480 490 500
RVWDLAALGD PALRSGEGVP RLQLQGHTDL INSVAISPDG RWIASGSADR
510 520 530 540 550
TIRLWQAEDG QLVRTIDSAA YPVTQGAGIT AVAFAPSGLA EEGSSPWILV
560 570 580 590 600
AANGNPAVYL WDPRSGALLK TLEADYPIEQ VLLSPDGRHL LAASASGIWI
610 620 630 640 650
WNVGTGSRER TLPQPLSGLA TLALSPDGRL LASSTDHRAQ QIKLWDLRSG
660 670 680 690 700
KELRTLGGQT WMVSALLFGP DGQTLLSGGA DGAIRIWGPE HPASEAEKGT

QP
Length:702
Mass (Da):74,603
Last modified:March 7, 2006 - v1
Checksum:i92B3D714D3ABC994
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC98274.1.
RefSeqiWP_011428966.1. NC_007775.1.
YP_473537.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC98274; ABC98274; CYA_0042.
KEGGicya:CYA_0042.
PATRICi23808347. VBISynSp90045_0042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC98274.1.
RefSeqiWP_011428966.1. NC_007775.1.
YP_473537.1. NC_007775.1.

3D structure databases

ProteinModelPortaliQ2JY38.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_0042.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC98274; ABC98274; CYA_0042.
KEGGicya:CYA_0042.
PATRICi23808347. VBISynSp90045_0042.

Phylogenomic databases

eggNOGiCOG2319.
HOGENOMiHOG000127899.
OMAiIEIWDLK.
OrthoDBiEOG66F036.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-42-MONOMER.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00069. Pkinase. 1 hit.
PF00400. WD40. 4 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JY38_SYNJA
AccessioniPrimary (citable) accession number: Q2JY38
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 1, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.