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Protein
Submitted name:

GAF/SpoIIE domain protein

Gene

CYA_0100

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321327:GHFX-100-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GAF/SpoIIE domain proteinImported
Gene namesi
Ordered Locus Names:CYA_0100Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_0100.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000232401.
KOiK07315.
OMAiRPAFQVG.
OrthoDBiEOG6ZH2CT.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JXZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPAILPAPP KPEPVAELGT DQQPMLYLLG GLAFALRSFN NLNQILELTA
60 70 80 90 100
FVASQLTAAD GGALVLFNPN GTIQLDQLHC SDLDRREQIR AEMEQIAQAL
110 120 130 140 150
SAQEPILKTE GSLSVKIPAL EHLLDERLRQ SLGPDVRLFG TPLLIRSSVQ
160 170 180 190 200
GRLYVFSRQP GYQWNERRQQ LLRLVADQAG VAIENERLTA ALRRKMALEK
210 220 230 240 250
EMEIGSYIQT QLLPRQYPQV PGIRLAARCR VASKVGGDYY DFIKIPSERP
260 270 280 290 300
ENSRAAADEP VGSLAPSPEP SEDFRLAIVI GDVMGKGVPA GMLMSMTRAM
310 320 330 340 350
VRAEALNRHS PARVLQHLNR AMYSDLENSN RFISLFYSEY DPRSRRLCFS
360 370 380 390 400
NAAHNPTLWW RARSRDIQPL DTEGALIGLE EHSQYSESCV HLQPGDVVVY
410 420 430 440 450
YTDGYVEAAN TRGERLETSG LMEAIQRAAS RYESPEEILE NLFEQMDAFR
460 470 480 490
GRQGSHPVVP GPPVDAGLLF QDEISLRPEP VDDTTLVVLK VLPDSEPT
Length:498
Mass (Da):55,489
Last modified:March 7, 2006 - v1
Checksum:i95386B8C82588685
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC98330.1.
RefSeqiWP_011429022.1. NC_007775.1.
YP_473593.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC98330; ABC98330; CYA_0100.
KEGGicya:CYA_0100.
PATRICi23808465. VBISynSp90045_0101.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC98330.1.
RefSeqiWP_011429022.1. NC_007775.1.
YP_473593.1. NC_007775.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_0100.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC98330; ABC98330; CYA_0100.
KEGGicya:CYA_0100.
PATRICi23808465. VBISynSp90045_0101.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000232401.
KOiK07315.
OMAiRPAFQVG.
OrthoDBiEOG6ZH2CT.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-100-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JXZ2_SYNJA
AccessioniPrimary (citable) accession number: Q2JXZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 1, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.