Q2JWE4 (Y708_SYNJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0102 protein CYA_0708

Gene names

Ordered Locus Names:

CYA_0708

Organism

Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]

Taxonomic identifier

321327 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	131 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 131	131	UPF0102 protein CYA_0708 HAMAP MF_00048		PRO_0000336273

Sequences

	Sequence		Length	Mass (Da)
	Q2JWE4 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 9F8E02B33E2C0EEF	FASTA	131	14,836
	10 20 30 40 50 60 MPKRTSLQNM GEAGEACVRQ YLEEQGWQIL AQQWRCRWGE LDLVASRAGE LIFVEVKTRS 70 80 90 100 110 120 GQGWDQKGLL AVGIQKQQRL IRAAQAFLSQ HPDLAELACR FDVALVEQRP GKEGVSYALA 130 DYLQGAFELW E

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-3-3Ab.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000239 Genomic DNA. Translation: ABC98919.1.
RefSeq	YP_474182.1. NC_007775.1.
3D structure databases
ProteinModelPortal	Q2JWE4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JWE4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3897210.
GenomeReviews	Gene locus CYA_0708 in contig CP000239_GR.
KEGG	cya:CYA_0708.
PATRIC	23809679. VBISynSp90045_0702.
TIGR	CYA_0708.
Phylogenomic databases
eggNOG	COG0792.
HOGENOM	HBG710155.
OMA	ICRFDVA.
PhylomeDB	Q2JWE4.
ProtClustDB	PRK12497.
Enzyme and pathway databases
BioCyc	SSP321327:CYA_0708-MONOMER.
Family and domain databases
HAMAP	MF_00048. UPF0102. [Tree]
InterPro	IPR011856. Endonuc_TnsA/Hjc/tRNA. IPR011335. Restrct_endonuc_II-like. IPR003509. UPF0102. [Graphical view]
Gene3D	G3DSA:3.40.1350.10. Endonuc_TnsA/Hjc/tRNA. 1 hit.
KO	K07460.
Pfam	PF02021. UPF0102. 1 hit. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
TIGRFAMs	TIGR00252. TIGR00252. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y708_SYNJA

Accession

Primary (citable) accession number: Q2JWE4

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program