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Q2JW13 (Q2JW13_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL ABC99064.1
Gene names
Ordered Locus Names:CYA_0860
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue271N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
Q2JW13 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: B7A8A844F7FEA23B

FASTA22425,232
        10         20         30         40         50         60 
MYQLIHSRIQ AIRAQIPEHV EIMAVSKGYS VNHIRAAYRA GIRHFGESRV QEAAAKQAQL 

        70         80         90        100        110        120 
QDLTDIVWHL IGHLQTNKVK PALRQFAWID SVDSLRLAKL INQKAWELHL TPKLCLQVKL 

       130        140        150        160        170        180 
APDPHKFGWL IPDLLQSLPQ LNQLLQVQIV GLMTILPLGL SSEAALELFR KLAELADHIQ 

       190        200        210        220 
RSGYEHLQLH TLSMGMSDDY PLAVAAGSNL IRLGRALFAD AERK

« Hide

References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000239 Genomic DNA. Translation: ABC99064.1.
RefSeqYP_474327.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JW13.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JW13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3898110.
GenomeReviewsGene locus CYA_0860 in contig CP000239_GR.
KEGGcya:CYA_0860.
PATRIC23809981. VBISynSp90045_0851.
TIGRCYA_0860.

Phylogenomic databases

eggNOGCOG0325.
HOGENOMHBG289671.
OMAHGSTMVR.
PhylomeDBQ2JW13.
ProtClustDBCLSK750263.

Enzyme and pathway databases

BioCycSSP321327:CYA_0860-MONOMER.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2JW13_SYNJA
AccessionPrimary (citable) accession number: Q2JW13
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info