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Q2JVC4 (Q2JVC4_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CYA_1130 EMBL ABC99319.1
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP] EMBL ABC99319.1
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length356 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q2JVC4 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 60BB2E1FA6CBCCDB

FASTA35639,881
        10         20         30         40         50         60 
MSCLDCPALP TFLQEAGRLF LWLPTPHTHR KIWQALEAKT EVPVQLLEDL GLVVAIAQGA 

        70         80         90        100        110        120 
LKKTLETMAE VLSQEEMQAS RALFLPGDRD PCWQDCARVE SLLQLFHRTQ AELLLELLKE 

       130        140        150        160        170        180 
NRLTTYFQPI VRARDPAWVV GHEALVRGLD REGKVIGPDL LFATAREAGL LYHLDLAARR 

       190        200        210        220        230        240 
TAIAAATQHR LEGDLFINFS PTAIYDPAFC LRSTVWAISR AGIPPERVVF EVNESDRSPD 

       250        260        270        280        290        300 
LDHLQWILRF YRQAGFRVAL DDLGAGYGSL NLLHRLQPDV IKLDRELIRG VDGDPYKAVI 

       310        320        330        340        350 
AQKVLELAQE LGIVTLAEGI ETAEELQWVR DHGVDLVQGF FIARPQPVPP RLGSIG 

« Hide

References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab EMBL ABC99319.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000239 Genomic DNA. Translation: ABC99319.1.
RefSeqYP_474582.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JVC4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING321327.CYA_1130.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC99319; ABC99319; CYA_1130.
GeneID3898820.
KEGGcya:CYA_1130.
PATRIC23810533. VBISynSp90045_1121.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2200.
HOGENOMHOG000218396.
OMAQRSIHSL.
OrthoDBEOG69GZGV.

Enzyme and pathway databases

BioCycSSP321327:GHFX-1125-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001633. Diguanylate_PEstase_EAL_dom.
[Graphical view]
PfamPF00563. EAL. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JVC4_SYNJA
AccessionPrimary (citable) accession number: Q2JVC4
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)