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Protein
Submitted name:

EAL domain protein

Gene

CYA_1130

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1125-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
EAL domain proteinImported
Gene namesi
Ordered Locus Names:CYA_1130Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_1130.

Structurei

3D structure databases

ProteinModelPortaliQ2JVC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2200.
HOGENOMiHOG000218396.
OMAiSHMQPIV.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2JVC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCLDCPALP TFLQEAGRLF LWLPTPHTHR KIWQALEAKT EVPVQLLEDL
60 70 80 90 100
GLVVAIAQGA LKKTLETMAE VLSQEEMQAS RALFLPGDRD PCWQDCARVE
110 120 130 140 150
SLLQLFHRTQ AELLLELLKE NRLTTYFQPI VRARDPAWVV GHEALVRGLD
160 170 180 190 200
REGKVIGPDL LFATAREAGL LYHLDLAARR TAIAAATQHR LEGDLFINFS
210 220 230 240 250
PTAIYDPAFC LRSTVWAISR AGIPPERVVF EVNESDRSPD LDHLQWILRF
260 270 280 290 300
YRQAGFRVAL DDLGAGYGSL NLLHRLQPDV IKLDRELIRG VDGDPYKAVI
310 320 330 340 350
AQKVLELAQE LGIVTLAEGI ETAEELQWVR DHGVDLVQGF FIARPQPVPP

RLGSIG
Length:356
Mass (Da):39,881
Last modified:March 7, 2006 - v1
Checksum:i60BB2E1FA6CBCCDB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99319.1.
RefSeqiWP_011430000.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC99319; ABC99319; CYA_1130.
KEGGicya:CYA_1130.
PATRICi23810533. VBISynSp90045_1121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99319.1.
RefSeqiWP_011430000.1. NC_007775.1.

3D structure databases

ProteinModelPortaliQ2JVC4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_1130.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC99319; ABC99319; CYA_1130.
KEGGicya:CYA_1130.
PATRICi23810533. VBISynSp90045_1121.

Phylogenomic databases

eggNOGiCOG2200.
HOGENOMiHOG000218396.
OMAiSHMQPIV.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1125-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JVC4_SYNJA
AccessioniPrimary (citable) accession number: Q2JVC4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.