Q2JV94 (RL15_SYNJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	CYA_1161

Organism

Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]

Taxonomic identifier

321327 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	157 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 157	157	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_0000251576

Sequences

	Sequence		Length	Mass (Da)
	Q2JV94 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 51B20600E85FAA60	FASTA	157	16,606
	10 20 30 40 50 60 MRLEDIRPQP GSTRRRRRLG RGIAAGQGAS CGKGMRGQKA RKGGGPRPGF EGGQTPLYRR 70 80 90 100 110 120 LPKLKHFPRY VRRPQYTLIN LRALAKLPAG SEVSLESLMD LGIVTTNDGP LKILGDGEVG 130 140 150 VPLTIRAAAI TPSARAKVEA AGGRVELVGS QTASAGS

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-3-3Ab.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000239 Genomic DNA. Translation: ABC99349.1.
RefSeq	YP_474612.1. NC_007775.1.
3D structure databases
ProteinModelPortal	Q2JV94.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2JV94.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3898870.
GenomeReviews	Gene locus CYA_1161 in contig CP000239_GR.
KEGG	cya:CYA_1161.
PATRIC	23810591. VBISynSp90045_1150.
TIGR	CYA_1161.
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HBG727142.
OMA	RKGRGHA.
PhylomeDB	Q2JV94.
ProtClustDB	PRK05592.
Enzyme and pathway databases
BioCyc	SSP321327:CYA_1161-MONOMER.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_SYNJA

Accession

Primary (citable) accession number: Q2JV94

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 3, 2006
Last sequence update:	March 7, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program