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Protein
Submitted name:

Ribulose bisphosphate carboxylase, small subunit

Gene

cbbS

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1190-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbSImported
Ordered Locus Names:CYA_1196Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
Proteomesi
  • UP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_1196.

Structurei

3D structure databases

ProteinModelPortaliQ2JV65.
SMRiQ2JV65. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 10698RuBisCO_smallInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141332.
KOiK01602.
OMAiSAYPNCF.
OrthoDBiEOG6G20PM.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JV65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTLPKERRY ETFSYLPPMT DLQILKQVQY ILDQGYIPAI EFNESSQPTD
60 70 80 90 100
HYWTLWKLPL FSATSPQEVL TEVQACRSAY PNCFIRVVGF DNIKQCQVLS
110
FLVYKPSGLR
Length:110
Mass (Da):12,870
Last modified:March 7, 2006 - v1
Checksum:i2936535945B778BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99382.1.
RefSeqiWP_011430063.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC99382; ABC99382; CYA_1196.
KEGGicya:CYA_1196.
PATRICi23810663. VBISynSp90045_1185.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99382.1.
RefSeqiWP_011430063.1. NC_007775.1.

3D structure databases

ProteinModelPortaliQ2JV65.
SMRiQ2JV65. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_1196.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC99382; ABC99382; CYA_1196.
KEGGicya:CYA_1196.
PATRICi23810663. VBISynSp90045_1185.

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141332.
KOiK01602.
OMAiSAYPNCF.
OrthoDBiEOG6G20PM.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1190-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JV65_SYNJA
AccessioniPrimary (citable) accession number: Q2JV65
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: March 16, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.