Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribulose bisphosphate carboxylase, small subunit

Gene

cbbS

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1190-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbSImported
Ordered Locus Names:CYA_1196Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_1196.

Structurei

3D structure databases

ProteinModelPortaliQ2JV65.
SMRiQ2JV65. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiWNPAIEH.
OrthoDBiEOG6G20PM.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JV65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTLPKERRY ETFSYLPPMT DLQILKQVQY ILDQGYIPAI EFNESSQPTD
60 70 80 90 100
HYWTLWKLPL FSATSPQEVL TEVQACRSAY PNCFIRVVGF DNIKQCQVLS
110
FLVYKPSGLR
Length:110
Mass (Da):12,870
Last modified:March 7, 2006 - v1
Checksum:i2936535945B778BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99382.1.
RefSeqiWP_011430063.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC99382; ABC99382; CYA_1196.
KEGGicya:CYA_1196.
PATRICi23810663. VBISynSp90045_1185.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABC99382.1.
RefSeqiWP_011430063.1. NC_007775.1.

3D structure databases

ProteinModelPortaliQ2JV65.
SMRiQ2JV65. Positions 1-106.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_1196.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABC99382; ABC99382; CYA_1196.
KEGGicya:CYA_1196.
PATRICi23810663. VBISynSp90045_1185.

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiWNPAIEH.
OrthoDBiEOG6G20PM.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1190-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JV65_SYNJA
AccessioniPrimary (citable) accession number: Q2JV65
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.