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Q2JV17 (Q2JV17_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CYA_1252 EMBL ABC99435.1
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP] EMBL ABC99435.1
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2JV17 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 8969E1EB419C64C4

FASTA40645,438
        10         20         30         40         50         60 
MSHGPFAFDL SPGEAKFEAA AALRLSQRLI QVGIALSSET DLRRLLELIV AQARELTCCD 

        70         80         90        100        110        120 
GASLFIREGE ELRFFVVNRN EELQDLRLPL APSSIVGYVV LTGESLNLPD VYRLPAGLPY 

       130        140        150        160        170        180 
AFNSQVDQQT GYRTRSLLTV PMRDPSGNIL GALQLLNRLR PDRPADLAPD QVADWSQPFS 

       190        200        210        220        230        240 
ELEVQVAEAL ASQAAVAYQN VRLREELKAA HLETIFCLAQ AAEYRDQDTA FHLKRMSHYS 

       250        260        270        280        290        300 
RILAKELGLS SHEQELIFYA SPLHDVGKIG IPDAILQKPG PLTPEERLIM NRHPEIGYEI 

       310        320        330        340        350        360 
LSKSDSELMK KSAIIALTHH EKFDGSGYPR GLKGEEIPLE GRIVALADVF DALASRRPYK 

       370        380        390        400 
KAWNLDEIFG FVESQSSSHF DPHVVAAFTR GRGEILEIYH RYQEPR 

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab EMBL ABC99435.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000239 Genomic DNA. Translation: ABC99435.1.
RefSeqYP_474698.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JV17.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING321327.CYA_1252.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABC99435; ABC99435; CYA_1252.
GeneID3899383.
KEGGcya:CYA_1252.
PATRIC23810782. VBISynSp90045_1242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3437.
HOGENOMHOG000262424.
OMAVEAASIW.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK2397676.

Enzyme and pathway databases

BioCycSSP321327:GHFX-1246-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR003018. GAF.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamPF01590. GAF. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JV17_SYNJA
AccessionPrimary (citable) accession number: Q2JV17
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)