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Q2JV17

- Q2JV17_SYNJA

UniProt

Q2JV17 - Q2JV17_SYNJA

Protein
Submitted name:

GAF domain protein

Gene

CYA_1252

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (07 Mar 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. phosphoric diester hydrolase activity Source: InterPro

    Enzyme and pathway databases

    BioCyciSSP321327:GHFX-1246-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    GAF domain proteinImported
    Gene namesi
    Ordered Locus Names:CYA_1252Imported
    OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
    Taxonomic identifieri321327 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000008818: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi321327.CYA_1252.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2JV17.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3437.
    HOGENOMiHOG000262424.
    OMAiVEAASIW.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    Gene3Di1.10.3210.10. 1 hit.
    3.30.450.40. 1 hit.
    InterProiIPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    [Graphical view]
    PfamiPF01590. GAF. 1 hit.
    [Graphical view]
    SMARTiSM00065. GAF. 1 hit.
    SM00471. HDc. 1 hit.
    [Graphical view]
    SUPFAMiSSF55781. SSF55781. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2JV17-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSHGPFAFDL SPGEAKFEAA AALRLSQRLI QVGIALSSET DLRRLLELIV    50
    AQARELTCCD GASLFIREGE ELRFFVVNRN EELQDLRLPL APSSIVGYVV 100
    LTGESLNLPD VYRLPAGLPY AFNSQVDQQT GYRTRSLLTV PMRDPSGNIL 150
    GALQLLNRLR PDRPADLAPD QVADWSQPFS ELEVQVAEAL ASQAAVAYQN 200
    VRLREELKAA HLETIFCLAQ AAEYRDQDTA FHLKRMSHYS RILAKELGLS 250
    SHEQELIFYA SPLHDVGKIG IPDAILQKPG PLTPEERLIM NRHPEIGYEI 300
    LSKSDSELMK KSAIIALTHH EKFDGSGYPR GLKGEEIPLE GRIVALADVF 350
    DALASRRPYK KAWNLDEIFG FVESQSSSHF DPHVVAAFTR GRGEILEIYH 400
    RYQEPR 406
    Length:406
    Mass (Da):45,438
    Last modified:March 7, 2006 - v1
    Checksum:i8969E1EB419C64C4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000239 Genomic DNA. Translation: ABC99435.1.
    RefSeqiWP_011430115.1. NC_007775.1.
    YP_474698.1. NC_007775.1.

    Genome annotation databases

    EnsemblBacteriaiABC99435; ABC99435; CYA_1252.
    GeneIDi3899383.
    KEGGicya:CYA_1252.
    PATRICi23810782. VBISynSp90045_1242.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000239 Genomic DNA. Translation: ABC99435.1 .
    RefSeqi WP_011430115.1. NC_007775.1.
    YP_474698.1. NC_007775.1.

    3D structure databases

    ProteinModelPortali Q2JV17.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 321327.CYA_1252.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABC99435 ; ABC99435 ; CYA_1252 .
    GeneIDi 3899383.
    KEGGi cya:CYA_1252.
    PATRICi 23810782. VBISynSp90045_1242.

    Phylogenomic databases

    eggNOGi COG3437.
    HOGENOMi HOG000262424.
    OMAi VEAASIW.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci SSP321327:GHFX-1246-MONOMER.

    Family and domain databases

    Gene3Di 1.10.3210.10. 1 hit.
    3.30.450.40. 1 hit.
    InterProi IPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    [Graphical view ]
    Pfami PF01590. GAF. 1 hit.
    [Graphical view ]
    SMARTi SM00065. GAF. 1 hit.
    SM00471. HDc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55781. SSF55781. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
      Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
      ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JA-3-3AbImported.

    Entry informationi

    Entry nameiQ2JV17_SYNJA
    AccessioniPrimary (citable) accession number: Q2JV17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 7, 2006
    Last sequence update: March 7, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3