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Q2JV17

- Q2JV17_SYNJA

UniProt

Q2JV17 - Q2JV17_SYNJA

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Protein
Submitted name:

GAF domain protein

Gene
CYA_1252
Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. phosphoric diester hydrolase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1246-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GAF domain proteinImported
Gene namesi
Ordered Locus Names:CYA_1252Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_1252.

Structurei

3D structure databases

ProteinModelPortaliQ2JV17.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3437.
HOGENOMiHOG000262424.
OMAiVEAASIW.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JV17-1 [UniParc]FASTAAdd to Basket

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MSHGPFAFDL SPGEAKFEAA AALRLSQRLI QVGIALSSET DLRRLLELIV    50
AQARELTCCD GASLFIREGE ELRFFVVNRN EELQDLRLPL APSSIVGYVV 100
LTGESLNLPD VYRLPAGLPY AFNSQVDQQT GYRTRSLLTV PMRDPSGNIL 150
GALQLLNRLR PDRPADLAPD QVADWSQPFS ELEVQVAEAL ASQAAVAYQN 200
VRLREELKAA HLETIFCLAQ AAEYRDQDTA FHLKRMSHYS RILAKELGLS 250
SHEQELIFYA SPLHDVGKIG IPDAILQKPG PLTPEERLIM NRHPEIGYEI 300
LSKSDSELMK KSAIIALTHH EKFDGSGYPR GLKGEEIPLE GRIVALADVF 350
DALASRRPYK KAWNLDEIFG FVESQSSSHF DPHVVAAFTR GRGEILEIYH 400
RYQEPR 406
Length:406
Mass (Da):45,438
Last modified:March 7, 2006 - v1
Checksum:i8969E1EB419C64C4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000239 Genomic DNA. Translation: ABC99435.1.
RefSeqiWP_011430115.1. NC_007775.1.
YP_474698.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABC99435; ABC99435; CYA_1252.
GeneIDi3899383.
KEGGicya:CYA_1252.
PATRICi23810782. VBISynSp90045_1242.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000239 Genomic DNA. Translation: ABC99435.1 .
RefSeqi WP_011430115.1. NC_007775.1.
YP_474698.1. NC_007775.1.

3D structure databases

ProteinModelPortali Q2JV17.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 321327.CYA_1252.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABC99435 ; ABC99435 ; CYA_1252 .
GeneIDi 3899383.
KEGGi cya:CYA_1252.
PATRICi 23810782. VBISynSp90045_1242.

Phylogenomic databases

eggNOGi COG3437.
HOGENOMi HOG000262424.
OMAi VEAASIW.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci SSP321327:GHFX-1246-MONOMER.

Family and domain databases

Gene3Di 1.10.3210.10. 1 hit.
3.30.450.40. 1 hit.
InterProi IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view ]
Pfami PF01590. GAF. 1 hit.
[Graphical view ]
SMARTi SM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view ]
SUPFAMi SSF55781. SSF55781. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JV17_SYNJA
AccessioniPrimary (citable) accession number: Q2JV17
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 3, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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