Q2JV17 (Q2JV17_SYNJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GAF domain protein EMBL ABC99435.1

Gene names

Ordered Locus Names:

CYA_1252

Organism

Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP] EMBL ABC99435.1

Taxonomic identifier

321327 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	406 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2JV17 [UniParc]. Last modified March 7, 2006. Version 1. Checksum: 8969E1EB419C64C4	FASTA	406	45,438
	10 20 30 40 50 60 MSHGPFAFDL SPGEAKFEAA AALRLSQRLI QVGIALSSET DLRRLLELIV AQARELTCCD 70 80 90 100 110 120 GASLFIREGE ELRFFVVNRN EELQDLRLPL APSSIVGYVV LTGESLNLPD VYRLPAGLPY 130 140 150 160 170 180 AFNSQVDQQT GYRTRSLLTV PMRDPSGNIL GALQLLNRLR PDRPADLAPD QVADWSQPFS 190 200 210 220 230 240 ELEVQVAEAL ASQAAVAYQN VRLREELKAA HLETIFCLAQ AAEYRDQDTA FHLKRMSHYS 250 260 270 280 290 300 RILAKELGLS SHEQELIFYA SPLHDVGKIG IPDAILQKPG PLTPEERLIM NRHPEIGYEI 310 320 330 340 350 360 LSKSDSELMK KSAIIALTHH EKFDGSGYPR GLKGEEIPLE GRIVALADVF DALASRRPYK 370 380 390 400 KAWNLDEIFG FVESQSSSHF DPHVVAAFTR GRGEILEIYH RYQEPR

References

[1]

"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F. ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JA-3-3Ab.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000239 Genomic DNA. Translation: ABC99435.1.
RefSeq	YP_474698.1. NC_007775.1.
3D structure databases
ProteinModelPortal	Q2JV17.
ModBase	Search...
Protein-protein interaction databases
STRING	321327.CYA_1252.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABC99435; ABC99435; CYA_1252.
GeneID	3899383.
KEGG	cya:CYA_1252.
PATRIC	23810782. VBISynSp90045_1242.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3437.
HOGENOM	HOG000262424.
OMA	VEAASIW.
ProtClustDB	CLSK2397676.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
InterPro	IPR003018. GAF. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. [Graphical view]
Pfam	PF01590. GAF. 1 hit. [Graphical view]
SMART	SM00065. GAF. 1 hit. SM00471. HDc. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q2JV17_SYNJA

Accession

Primary (citable) accession number: Q2JV17

Entry history

Integrated into UniProtKB/TrEMBL:	March 7, 2006
Last sequence update:	March 7, 2006
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)