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Unreviewed, UniProtKB/TrEMBL Q2JUX2 (Q2JUX2_SYNJA)

Last modified June 16, 2009. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Dihydrodipicolinate reductase EMBL ABC99485.1
    EC=1.3.1.26
Gene names
Name: dapB EMBL ABC99485.1
Ordered Locus Names: CYA_1305
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

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Protein attributes

Sequence length293 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

2,3,4,5-tetrahydrodipicolinate + NAD(P)+ = 2,3-dihydrodipicolinate + NAD(P)H. Spearmint SPM011770

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; tetrahydrodipicolinate from L-aspartate: step 4/4. Spearmint SPM011770

Subcellular location

Cytoplasm By similarity. Spearmint SPM011770

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Sequences

Sequence LengthMass (Da)Tools
Q2JUX2-1 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: AD4282444CE33E5D

FASTA29331,218
        10         20         30         40         50         60 
MTTAVEQKRR EEGAAIGEGT AASEPIPVLV VGALGKMGRE VVRAVAQTPD MKLVGAVARS 

        70         80         90        100        110        120 
QLGSDIGEVL GLGSLGVEIT DDLAGQLLRL SQRSARGVMV DFTHPRSVYE NVRSAIAFGV 

       130        140        150        160        170        180 
RPVVGTTGLT PEQVERLRDL ADKSGVGCLI APNFAIGMIL LQQMALQAAQ YFDHVEIVEL 

       190        200        210        220        230        240 
HHNRKVDAPS GTALQTAQRL GQLGKAFNPP EVEEKELIPG SRGGIPGPNI PIHSVRLPGL 

       250        260        270        280        290 
IAHQEVIFGG MGQTLTLRHD ITDRMAFMPG VILGIRKVLQ LKGLVYGLEQ VLS

« Hide

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000239 Genomic DNA. Translation: ABC99485.1.
RefSeqYP_474748.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3899474.
GenomeReviewsGene locus CYA_1305 in contig CP000239_GR.
KEGGcya:CYA_1305.
TIGRCYA_1305.

Phylogenomic databases

HOGENOMQ2JUX2.
OMAQ2JUX2. TCIKTAE.

Family and domain databases

InterProIPR000846. DapB.
IPR011770. DapB_bac/pln.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHERPTHR20836. DapB_bac/pln. 1 hit.
PfamPF05173. DapB_C. 1 hit.
PF01113. DapB_N. 1 hit.
[Graphical view]
ProDomPD004105. DapB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00036. dapB. 1 hit.
PROSITEPS01298. DAPB. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ2JUX2_SYNJA
AccessionPrimary (citable) accession number: Q2JUX2
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: June 16, 2009
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information