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Protein
Submitted name:

ABC1 domain protein

Gene

CYA_1948

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1940-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ABC1 domain proteinImported
Gene namesi
Ordered Locus Names:CYA_1948Imported
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)Imported
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_1948.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0661.
HOGENOMiHOG000264439.
OMAiGQIMATR.
OrthoDBiEOG68Q0KW.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 3 hits.

Sequencei

Sequence statusi: Complete.

Q2JTA8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFARLAQNS ARQAEILEVV LRHGWDYMRR LLSLGKAEEP QLPPPLVLRN
60 70 80 90 100
ILVDLGPVYV KLGQLLSTRP DLLPREYIEA LSTLQSNVPP VPWNAVEILL
110 120 130 140 150
RQQLRKPLEQ VFSSLDTEAV AAGSIAQVHR AHLVSGEAVA LKIQRPGVEA
160 170 180 190 200
IVERDTRLIR SIAELVAQTE FGRLADVVAL ADEFCRAIQA ELDFTQEARH
210 220 230 240 250
TEQLRQRLQA GRWFDPNQLV VPRVYWALTT PKVLTLEWIE GKPLLEADRS
260 270 280 290 300
DAEPQQLARL LTRAFFQQIC IDGYFHADPH PGNLFYLGSG RVALLDCGMI
310 320 330 340 350
GRLDPRTQQI VLELILAIVS LDAQRCAELT LELALPESPR GRLRDPAVSL
360 370 380 390 400
AQLQREYERL LRQYYTLTVA ELDFSQLFSE ILQAARRNQI RIPGNLGLCA
410 420 430 440 450
KALANLEGIA RQLTPDYNLP EQIRPLMADV FRQQLLGEAP LPSLLRTALD
460 470 480 490 500
LKNLSLQSPR QLEVLLSRIT SETQRWNLTI QELEDLRISL DQSANRLSYS
510 520 530 540 550
ILVGSLIIGA AIISAQTQRF QVFWLSELLF GAASLLGLWL ILSILRSGRL

RN
Length:552
Mass (Da):62,213
Last modified:March 7, 2006 - v1
Checksum:iFCF34980D724B817
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABD00094.1.
RefSeqiWP_011430768.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABD00094; ABD00094; CYA_1948.
KEGGicya:CYA_1948.
PATRICi23812168. VBISynSp90045_1921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABD00094.1.
RefSeqiWP_011430768.1. NC_007775.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_1948.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD00094; ABD00094; CYA_1948.
KEGGicya:CYA_1948.
PATRICi23812168. VBISynSp90045_1921.

Phylogenomic databases

eggNOGiCOG0661.
HOGENOMiHOG000264439.
OMAiGQIMATR.
OrthoDBiEOG68Q0KW.

Enzyme and pathway databases

BioCyciSSP321327:GHFX-1940-MONOMER.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3AbImported.

Entry informationi

Entry nameiQ2JTA8_SYNJA
AccessioniPrimary (citable) accession number: Q2JTA8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.