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Q2JSE3 (Q2JSE3_SYNJA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl hydrolase, family 31 EMBL ABD00438.1
Gene names
Ordered Locus Names:CYA_2306
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length811 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABD00438.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2JSE3 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: F83437D8D21E4B8A

FASTA81191,398
        10         20         30         40         50         60 
MGSSLFPCGL GLALRAAICP QPMLEPGEIF GQFPARPPQR QTCGSLQELQ IHPRGIQLLC 

        70         80         90        100        110        120 
RQGCWSVQVL TPRLLRLRFS PSGEFLPRRS WDVALADEEW PPAFFELQES PTQVHLATSQ 

       130        140        150        160        170        180 
VQLQIDRDPL RFSFRDPQGQ VFCADLPAGL SWGSDDIRLV KSLHPAERIY GLGERAGLLN 

       190        200        210        220        230        240 
KRGRRYSHWT RDCWGYDAQS DNLYLAIPFA LVLRPGLSYG LFLHCTHWSQ FDLGQADPKQ 

       250        260        270        280        290        300 
WAIEVRAPEL DYYLIYGPTP ALVLQTYTQL TGRTTLPPLW ALGYQQCRWS YASAAQVLAV 

       310        320        330        340        350        360 
AKQFRQRQIP CDAIYLDIDY MRGYRVFTWD PRRFPEPAQL MAQLHEAGFR GVAIVDPGVK 

       370        380        390        400        410        420 
FDPEADYAVF DEGLAQDFFI RRADGHLFHG YVWPGKVLFP DFSCPEVRRW WGSWQRVLTQ 

       430        440        450        460        470        480 
AGVDGIWNDM NEPALNDRPF GDGGQIVDIP PDAPQGPPEE RTTHAEVHNL YGLLMARASR 

       490        500        510        520        530        540 
EGLEQLNPAR RPFVLTRSGF AGIQRWAAVW TGDNQSSWEH LEMSLPMLLN LGLSGVSFVG 

       550        560        570        580        590        600 
ADIGGFGGNA TPELFARWMQ MGILYPLMRG HSALGTRPHE PWSFGPEVEA IARQAIQLRY 

       610        620        630        640        650        660 
RLLPYLYSLF WESSQTGSPI LRPLFYEFPD DPQTYEISDQ ALLGSALLAA PVVRPGVRCR 

       670        680        690        700        710        720 
AVYLPAGTWF DWWTGQAQRG PGSILVPASL EQLPLFVRGG SILPLAPPCQ STAHLRRDQL 

       730        740        750        760        770        780 
HLRLYPGDGS FTLYEDDGQT LAYQSGHWAT TTFCLRQEAH QLVLEIQPRQ GSWIPPQRNW 

       790        800        810 
ILEPLGQSPL ILADSGQAQQ IRLPTPEGSR P

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JA-3-3Ab.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000239 Genomic DNA. Translation: ABD00438.1.
RefSeqYP_475701.1. NC_007775.1.

3D structure databases

ProteinModelPortalQ2JSE3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2JSE3.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3898740.
GenomeReviewsGene locus CYA_2306 in contig CP000239_GR.
KEGGcya:CYA_2306.
PATRIC23812870. VBISynSp90045_2266.
TIGRCYA_2306.

Phylogenomic databases

eggNOGCOG1501.
HOGENOMHBG441204.
OMAEPSVFNE.
PhylomeDBQ2JSE3.
ProtClustDBCLSK896264.

Enzyme and pathway databases

BioCycSSP321327:CYA_2306-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 2 hits.
KOK01187.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00129. GLYCOSYL_HYDROL_F31_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2JSE3_SYNJA
AccessionPrimary (citable) accession number: Q2JSE3
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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