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Protein

Glycogen synthase 2

Gene

glgA2

Organism
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway:iglycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei17 – 171ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciSSP321327:GHFX-2640-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 2UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 2UniRule annotation
Gene namesi
Name:glgA2UniRule annotation
Ordered Locus Names:CYA_2648
OrganismiSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime)
Taxonomic identifieri321327 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000008818 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Glycogen synthase 2PRO_0000241805Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi321327.CYA_2648.

Structurei

3D structure databases

ProteinModelPortaliQ2JRJ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2JRJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQARILFAAA EAAPIAKVGG MADVVGSLPV VLRKLGQDVR IIMPLYGFLW
60 70 80 90 100
DKFGPEPGQY PRSKDPIWSK QVMGQVADIY ESVLPGTDVP LYLVSHYCFA
110 120 130 140 150
PHRIYYGEDE FWRFTFFANA VAEFAWTYYP WKPNIIHCHD WHTGMIPAWM
160 170 180 190 200
HQAPDIGTVF TIHNLAYQGP WRWQLERMTW LPWYFSAHNT MAAGILYADQ
210 220 230 240 250
VNTVSPTYAM EIRTSLHGEG LQDLLAWKGE RLRGILNGID TEKFDPRTDP
260 270 280 290 300
ALEANFSIDD LSGRAVNKAA LQSRLGLTVN PDVFLMGMVA RLVEQKGIDL
310 320 330 340 350
LIQTLDRFLA YSDSQFVLLG SGEAYYEGRI REMAERHPGR MAYQQGYQPQ
360 370 380 390 400
LAQLIYGGAD VFLMPSRFEP CGISQMIAMR YGCVPIARRT GGLVDTVSHH
410 420 430 440 450
IPSKGIGTGY CFDRYEALDF YTCLARAWEA FQHKDTWQAL QKRGMATDFS
460 470 480
WQRSALEYLR LYELIMNLPL RPEKTSSENQ PAPT
Length:484
Mass (Da):55,068
Last modified:March 7, 2006 - v1
Checksum:i5F913357CEE1F023
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABD00760.1.
RefSeqiWP_011431431.1. NC_007775.1.

Genome annotation databases

EnsemblBacteriaiABD00760; ABD00760; CYA_2648.
KEGGicya:CYA_2648.
PATRICi23813558. VBISynSp90045_2605.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000239 Genomic DNA. Translation: ABD00760.1.
RefSeqiWP_011431431.1. NC_007775.1.

3D structure databases

ProteinModelPortaliQ2JRJ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi321327.CYA_2648.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD00760; ABD00760; CYA_2648.
KEGGicya:CYA_2648.
PATRICi23813558. VBISynSp90045_2605.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciSSP321327:GHFX-2640-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
    Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
    ISME J. 1:703-713(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JA-3-3Ab.

Entry informationi

Entry nameiGLGA2_SYNJA
AccessioniPrimary (citable) accession number: Q2JRJ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: March 7, 2006
Last modified: July 22, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.